RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 V9GY48 417 aaPredicted RBP10.12□□□□□ -0.79
PDCD4-201ENST00000280154 TLR2O60603 784 aa10.12□□□□□ -0.79
PDCD4-201ENST00000280154 HOXD8P13378 290 aaPredicted RBP10.12□□□□□ -0.79
PDCD4-201ENST00000280154 VARSP26640 1264 aaKnown RBP10.12□□□□□ -0.79
PDCD4-201ENST00000280154 RPP30P78346 268 aaKnown RBP10.12□□□□□ -0.79
PDCD4-201ENST00000280154 ARID5AQ03989 594 aa10.12□□□□□ -0.79
PDCD4-201ENST00000280154 TRPC3Q13507 836 aa10.12□□□□□ -0.79
PDCD4-201ENST00000280154 ZNF792Q3KQV3 632 aa10.12□□□□□ -0.79
PDCD4-201ENST00000280154 EMC10Q5UCC4 262 aa10.12□□□□□ -0.79
PDCD4-201ENST00000280154 LSM14AQ8ND56 463 aaKnown RBP10.12□□□□□ -0.79
PDCD4-201ENST00000280154 BCL7CQ8WUZ0 217 aaPredicted RBP10.12□□□□□ -0.79
PDCD4-201ENST00000280154 PSKH2Q96QS6 385 aa10.12□□□□□ -0.79
PDCD4-201ENST00000280154 PARK7Q99497 189 aaKnown RBP10.12□□□□□ -0.79
PDCD4-201ENST00000280154 NUP88Q99567 741 aaPredicted RBP10.12□□□□□ -0.79
PDCD4-201ENST00000280154 BRD9Q9H8M2 597 aa10.12□□□□□ -0.79
PDCD4-201ENST00000280154 ZFYVE28Q9HCC9 887 aa10.12□□□□□ -0.79
PDCD4-201ENST00000280154 ARHGEF38Q9NXL2 777 aa10.12□□□□□ -0.79
PDCD4-201ENST00000280154 FBXO40Q9UH90 709 aa10.12□□□□□ -0.79
PDCD4-201ENST00000280154 EXOC7Q9UPT5 735 aa10.12□□□□□ -0.79
PDCD4-201ENST00000280154 FRMPD2Q68DX3 1309 aaPredicted RBP10.11□□□□□ -0.79
PDCD4-201ENST00000280154 DOCK5Q9H7D0 1870 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 IGLV3-22A0A075B6J6 115 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 BLVRAP53004 296 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 DGKZQ13574 1117 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 PDIA5Q14554 519 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 MDH1BQ5I0G3 518 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 MCF2L2Q86YR7 1114 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 CCDC33Q8N5R6 958 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 ERMNQ8TAM6 284 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 CCDC110Q8TBZ0 833 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 GPT2Q8TD30 523 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 OTUD5Q96G74 571 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 WDR24Q96S15 920 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 TXNRD2Q9NNW7 524 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 TUFT1Q9NNX1 390 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 PTBP2Q9UKA9 531 aaKnown RBP10.11□□□□□ -0.79
PDCD4-201ENST00000280154 MRPL11Q9Y3B7 192 aaKnown RBP10.11□□□□□ -0.79
PDCD4-201ENST00000280154 TIMM22Q9Y584 194 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 PRRT4C9JH25 899 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 LAD1O00515 517 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 PPP1R37O75864 691 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 PAPOLAP51003 745 aaKnown RBP10.11□□□□□ -0.79
PDCD4-201ENST00000280154 HUNKP57058 714 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 FBXO11Q86XK2 927 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 NOSTRINQ8IVI9 506 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 DDX11Q96FC9 970 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 SPATC1LQ9H0A9 340 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 TRAV6A0A075B6T7 132 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 PDHXO00330 501 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 ATP8B1O43520 1251 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 DNTTP04053 509 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 CYP2C19P33261 490 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 HAAOP46952 286 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 CCDC183Q5T5S1 534 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 OLFML2BQ68BL8 750 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 DACT3Q96B18 629 aaPredicted RBP10.11□□□□□ -0.79
PDCD4-201ENST00000280154 DHX58Q96C10 678 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 ATG4CQ96DT6 458 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 HERPUD2Q9BSE4 406 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 TRIM8Q9BZR9 551 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 FAM107BQ9H098 131 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 KCNMB3Q9NPA1 279 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 FBXO28Q9NVF7 368 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 RCOR1Q9UKL0 485 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 GJD2Q9UKL4 321 aa10.11□□□□□ -0.79
PDCD4-201ENST00000280154 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.11□□□□□ -0.79
PDCD4-201ENST00000280154 STRNO43815 780 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 PRKAR2AP13861 404 aaKnown RBP10.1□□□□□ -0.79
PDCD4-201ENST00000280154 ALDH3A1P30838 453 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 LMAN1P49257 510 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 GABREP78334 506 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 KDSRQ06136 332 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 KIF5AQ12840 1032 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 PCNX4Q63HM2 1172 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 BLIDQ8IZY5 108 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 ZNF579Q8NAF0 562 aaKnown RBP10.1□□□□□ -0.79
PDCD4-201ENST00000280154 NLRP4Q96MN2 994 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 ZBED2Q9BTP6 218 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 SLC26A6Q9BXS9 759 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 CYP39A1Q9NYL5 469 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 CDC23Q9UJX2 597 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 UBIAD1Q9Y5Z9 338 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 SLC12A8A0AV02 714 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 A8MX80 341 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 FOXO6A8MYZ6 492 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 PPP6R2O75170 966 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 GNA11P29992 359 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 ERVK-9P63128 1117 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 ERVK-24P63145 666 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 ARHGAP4P98171 946 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 CNGA3Q16281 694 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 TJAP1Q5JTD0 557 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 C7orf61Q8IZ16 206 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 EXOC4Q96A65 974 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 CNDP2Q96KP4 475 aaKnown RBP10.1□□□□□ -0.79
PDCD4-201ENST00000280154 CMTM3Q96MX0 182 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 BBS2Q9BXC9 721 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 ADNPQ9H2P0 1102 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 CRLF2Q9HC73 371 aa10.1□□□□□ -0.79
PDCD4-201ENST00000280154 SYNGAP1Q96PV0 1343 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms