RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 TREML2Q5T2D2 321 aa15.24■□□□□ 0.03
TMEM47-201ENST00000275954 FAM83AQ86UY5 434 aa15.24■□□□□ 0.03
TMEM47-201ENST00000275954 RHOT1Q8IXI2 618 aa15.24■□□□□ 0.03
TMEM47-201ENST00000275954 RBBP8NLQ8NC74 664 aaPredicted RBP15.24■□□□□ 0.03
TMEM47-201ENST00000275954 SREK1Q8WXA9 508 aaKnown RBP15.24■□□□□ 0.03
TMEM47-201ENST00000275954 MIS12Q9H081 205 aa15.24■□□□□ 0.03
TMEM47-201ENST00000275954 OLFML3Q9NRN5 406 aa15.24■□□□□ 0.03
TMEM47-201ENST00000275954 COL16A1Q07092 1604 aaPredicted RBP15.24■□□□□ 0.03
TMEM47-201ENST00000275954 PHRF1Q9P1Y6 1649 aaKnown RBP15.24■□□□□ 0.03
TMEM47-201ENST00000275954 PHF20L1A8MW92 1017 aa15.24■□□□□ 0.03
TMEM47-201ENST00000275954 CETPP11597 493 aa15.24■□□□□ 0.03
TMEM47-201ENST00000275954 GPC3P51654 580 aa15.24■□□□□ 0.03
TMEM47-201ENST00000275954 ARSHQ5FYA8 562 aa15.24■□□□□ 0.03
TMEM47-201ENST00000275954 TBC1D1Q86TI0 1168 aaPredicted RBP15.24■□□□□ 0.03
TMEM47-201ENST00000275954 ZC3H18Q86VM9 953 aaKnown RBP15.24■□□□□ 0.03
TMEM47-201ENST00000275954 C18orf8Q96DM3 657 aa15.24■□□□□ 0.03
TMEM47-201ENST00000275954 RAB21Q9UL25 225 aa15.24■□□□□ 0.03
TMEM47-201ENST00000275954 C19orf81C9J6K1 198 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 I3L4J1 428 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 TROVE2P10155 538 aaKnown RBP eCLIP15.23■□□□□ 0.03
TMEM47-201ENST00000275954 ORC1Q13415 861 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 LONRF1Q17RB8 773 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 IL31RAQ8NI17 732 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 BAP1Q92560 729 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 TATDN2Q93075 761 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 KLHL29Q96CT2 875 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 AIPL1Q9NZN9 384 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 PPP1R9AQ9ULJ8 1098 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 GRAP2O75791 330 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 PRKCBP05771 671 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 SPATA31C1P0DKV0 1188 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 MSH2P43246 934 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 NOP14P78316 857 aaKnown RBP15.23■□□□□ 0.03
TMEM47-201ENST00000275954 KYNUQ16719 465 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 SV2AQ7L0J3 742 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 PDIK1LQ8N165 341 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 MKL1Q969V6 931 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 ERP44Q9BS26 406 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 CNOT10Q9H9A5 744 aaKnown RBP15.23■□□□□ 0.03
TMEM47-201ENST00000275954 TMEM8AQ9HCN3 771 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 RNF19AQ9NV58 838 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 SUCLA2Q9P2R7 463 aaPredicted RBP15.23■□□□□ 0.03
TMEM47-201ENST00000275954 FAM187AA6NFU0 413 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 ZNF263O14978 683 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 MED7O43513 233 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 FDX1P10109 184 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 HSD17B3P37058 310 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 DLG4P78352 724 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 SLC29A2Q14542 456 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 CCDC14Q49A88 953 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 SEPT1Q8WYJ6 367 aa15.23■□□□□ 0.03
TMEM47-201ENST00000275954 M0QYV0 167 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 HIRAP54198 1017 aaPredicted RBP15.22■□□□□ 0.03
TMEM47-201ENST00000275954 MEI1Q5TIA1 1274 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 IZUMO3Q5VZ72 239 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 APTXQ7Z2E3 356 aaKnown RBP15.22■□□□□ 0.03
TMEM47-201ENST00000275954 TADA2BQ86TJ2 420 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 CFAP57Q96MR6 1250 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 MYO7AQ13402 2215 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 SMTNL2Q2TAL5 461 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 FBXO25Q8TCJ0 367 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 CCT8L2Q96SF2 557 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 COL1A1P02452 1464 aaPredicted RBP15.22■□□□□ 0.03
TMEM47-201ENST00000275954 SPAG7O75391 227 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 MDH1P40925 334 aaKnown RBP15.22■□□□□ 0.03
TMEM47-201ENST00000275954 SESN3P58005 492 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 FAM102AQ5T9C2 384 aaPredicted RBP15.22■□□□□ 0.03
TMEM47-201ENST00000275954 CCDC62Q6P9F0 684 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 ZNF449Q6P9G9 518 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 ARHGEF18Q6ZSZ5 1173 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 SPATS2Q86XZ4 545 aaKnown RBP15.22■□□□□ 0.03
TMEM47-201ENST00000275954 STMN2Q93045 179 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 CFAP36Q96G28 342 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 ISCUQ9H1K1 167 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 DNAJC18Q9H819 358 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 PCDHB2Q9Y5E7 798 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 LSP1P33241 339 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 JAG1P78504 1218 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 ARHGEF19Q8IW93 802 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 ZBED8Q8IZ13 594 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 MCEEQ96PE7 176 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 PPP1R12CQ9BZL4 782 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 SNX25Q9H3E2 840 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 ZFYVE28Q9HCC9 887 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 CYP26B1Q9NR63 512 aa15.22■□□□□ 0.03
TMEM47-201ENST00000275954 KNL1Q8NG31 2342 aa15.21■□□□□ 0.03
TMEM47-201ENST00000275954 ZBED1O96006 694 aa15.21■□□□□ 0.03
TMEM47-201ENST00000275954 RPSAP08865 295 aaKnown RBP15.21■□□□□ 0.03
TMEM47-201ENST00000275954 PRLRP16471 622 aa15.21■□□□□ 0.03
TMEM47-201ENST00000275954 TBXAS1P24557 533 aaPredicted RBP15.21■□□□□ 0.03
TMEM47-201ENST00000275954 PCK1P35558 622 aa15.21■□□□□ 0.03
TMEM47-201ENST00000275954 RGS7P49802 495 aa15.21■□□□□ 0.03
TMEM47-201ENST00000275954 DHX34Q14147 1143 aaKnown RBP15.21■□□□□ 0.03
TMEM47-201ENST00000275954 CENPUQ71F23 418 aa15.21■□□□□ 0.03
TMEM47-201ENST00000275954 SRLQ86TD4 932 aa15.21■□□□□ 0.03
TMEM47-201ENST00000275954 ANKMY2Q8IV38 441 aa15.21■□□□□ 0.03
TMEM47-201ENST00000275954 FAM167AQ96KS9 214 aa15.21■□□□□ 0.03
TMEM47-201ENST00000275954 SLC38A10Q9HBR0 1119 aa15.21■□□□□ 0.03
TMEM47-201ENST00000275954 AGO4Q9HCK5 861 aaKnown RBP15.21■□□□□ 0.03
TMEM47-201ENST00000275954 ANKEF1Q9NU02 776 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms