RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 PDXDC1Q6P996 788 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 L3MBTL3Q96JM7 780 aaPredicted RBP12.52□□□□□ -0.4
SHPRH-201ENST00000275233 DACH2Q96NX9 599 aa12.52□□□□□ -0.4
SHPRH-201ENST00000275233 ASAP2O43150 1006 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 TRAPPC3O43617 180 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 ZNF543Q08ER8 600 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 AGBL1Q96MI9 1066 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 KLK14Q9P0G3 267 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 MAD2L2Q9UI95 211 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 PCDHB7Q9Y5E2 793 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 ARHGAP10A1A4S6 786 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 ATMINO43313 823 aaPredicted RBP12.52□□□□□ -0.41
SHPRH-201ENST00000275233 PRKCEQ02156 737 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 EMC2Q15006 297 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 SMTNL2Q2TAL5 461 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 KCNV1Q6PIU1 500 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 NAF1Q96HR8 494 aaKnown RBP12.52□□□□□ -0.41
SHPRH-201ENST00000275233 ZFYVE19Q96K21 471 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 DDX50Q9BQ39 737 aaKnown RBP12.52□□□□□ -0.41
SHPRH-201ENST00000275233 TEX13BQ9BXU2 312 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 ACTR5Q9H9F9 607 aaPredicted RBP12.52□□□□□ -0.41
SHPRH-201ENST00000275233 CPSF1Q10570 1443 aaKnown RBP12.52□□□□□ -0.41
SHPRH-201ENST00000275233 ATXN3P54252 364 aaPredicted RBP12.52□□□□□ -0.41
SHPRH-201ENST00000275233 CSE1LP55060 971 aaKnown RBP12.52□□□□□ -0.41
SHPRH-201ENST00000275233 TRIM72Q6ZMU5 477 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 FRMD5Q7Z6J6 570 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 C11orf96Q7Z7L8 435 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 ATPAF2Q8N5M1 289 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 SLC35G2Q8TBE7 412 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 TEX12Q9BXU0 123 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 ECT2Q9H8V3 914 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 PRR12Q9ULL5 1215 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 HAUS5O94927 633 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 ZFXP17010 805 aaPredicted RBP12.52□□□□□ -0.41
SHPRH-201ENST00000275233 ARL4DP49703 201 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 ARFIP2P53365 341 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 LRRC74AQ0VAA2 488 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 CUL3Q13618 768 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 MMS22LQ6ZRQ5 1243 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 SLC7A14Q8TBB6 771 aa12.52□□□□□ -0.41
SHPRH-201ENST00000275233 CHORDC1Q9UHD1 332 aaPredicted RBP12.52□□□□□ -0.41
SHPRH-201ENST00000275233 LSM7Q9UK45 103 aaKnown RBP12.52□□□□□ -0.41
SHPRH-201ENST00000275233 NPTXRO95502 500 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 PDGFRAP16234 1089 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 ALX1Q15699 326 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 ASPSCR1Q9BZE9 553 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 RUBCNLQ9H714 662 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 LIMA1Q9UHB6 759 aaKnown RBP12.51□□□□□ -0.41
SHPRH-201ENST00000275233 SH3BP1Q9Y3L3 701 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 PREX2Q70Z35 1606 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 ADGRA2Q96PE1 1338 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 SEC24DO94855 1032 aaPredicted RBP12.51□□□□□ -0.41
SHPRH-201ENST00000275233 TFRCP02786 760 aaKnown RBP12.51□□□□□ -0.41
SHPRH-201ENST00000275233 HMOX2P30519 316 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 RBP5P82980 135 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 TWF1Q12792 350 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 E2F4Q16254 413 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 HIF1AQ16665 826 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 IER5Q5VY09 327 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 RRM2BQ7LG56 351 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 NUP93Q8N1F7 819 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 GUF1Q8N442 669 aaKnown RBP12.51□□□□□ -0.41
SHPRH-201ENST00000275233 CEP70Q8NHQ1 597 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 PARK7Q99497 189 aaKnown RBP12.51□□□□□ -0.41
SHPRH-201ENST00000275233 KIFC3Q9BVG8 833 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 KATNAL1Q9BW62 490 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 MYOZ2Q9NPC6 264 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 PYGBP11216 843 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 P3H1Q32P28 736 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 ABHD8Q96I13 439 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 LCMT1Q9UIC8 334 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 LMNAP02545 664 aaKnown RBP12.51□□□□□ -0.41
SHPRH-201ENST00000275233 HUNKP57058 714 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 PPP2R2AP63151 447 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 SEZ6Q53EL9 994 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 ENOSF1Q7L5Y1 443 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 RPAINQ86UA6 219 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 RNF168Q8IYW5 571 aaPredicted RBP12.51□□□□□ -0.41
SHPRH-201ENST00000275233 RNPC3Q96LT9 517 aaKnown RBP12.51□□□□□ -0.41
SHPRH-201ENST00000275233 FBXO2Q9UK22 296 aaPredicted RBP12.51□□□□□ -0.41
SHPRH-201ENST00000275233 AURKCQ9UQB9 309 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 ACTR2P61160 394 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 SNRNP35Q16560 246 aaKnown RBP12.51□□□□□ -0.41
SHPRH-201ENST00000275233 EPC2Q52LR7 807 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 CYP4A22Q5TCH4 519 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 RAB42Q8N4Z0 105 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 B4GALNT2Q8NHY0 566 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 LRRC37BQ96QE4 947 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 SRPK1Q96SB4 655 aaKnown RBP12.51□□□□□ -0.41
SHPRH-201ENST00000275233 ZFATQ9P243 1243 aa12.51□□□□□ -0.41
SHPRH-201ENST00000275233 WDR19Q8NEZ3 1342 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 EEF2KO00418 725 aaKnown RBP12.5□□□□□ -0.41
SHPRH-201ENST00000275233 KLK7P49862 253 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 PAN2Q504Q3 1202 aaKnown RBP12.5□□□□□ -0.41
SHPRH-201ENST00000275233 ST13P4Q8IZP2 240 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-201ENST00000275233 ASAP3Q8TDY4 903 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 SH3TC2Q8TF17 1288 aa12.5□□□□□ -0.41
SHPRH-201ENST00000275233 RFFLQ8WZ73 363 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms