RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 DNAJC24Q6P3W2 148 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 TMEM154Q6P9G4 183 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 ZNF720Q7Z2F6 126 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 SDCCAG8Q86SQ7 713 aaPredicted RBP12.11□□□□□ -0.47
SKP2-202ENST00000274255 TTC8Q8TAM2 541 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 SYN2Q92777 582 aaPredicted RBP12.11□□□□□ -0.47
SKP2-202ENST00000274255 PCDHB18PQ96TA0 734 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 MEIS2O14770 477 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 BBOX1O75936 387 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 PPP4CP60510 307 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 CLUL1Q15846 466 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 DCAF12L1Q5VU92 463 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 C1orf228Q6PIY5 440 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 CYP4X1Q8N118 509 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 CNKSR1Q969H4 720 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 RMDN3Q96TC7 470 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 GLIS2Q9BZE0 524 aaPredicted RBP12.11□□□□□ -0.47
SKP2-202ENST00000274255 OSBPL8Q9BZF1 889 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 FMN2Q9NZ56 1722 aa12.11□□□□□ -0.47
SKP2-202ENST00000274255 COL5A2P05997 1499 aaPredicted RBP12.11□□□□□ -0.47
SKP2-202ENST00000274255 NCF2P19878 526 aaPredicted RBP12.1□□□□□ -0.47
SKP2-202ENST00000274255 FNTAP49354 379 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 TMPRSS15P98073 1019 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 CDR2Q01850 454 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 CNGA2Q16280 664 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 EMC1Q8N766 993 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 C7orf31Q8N865 590 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 SPDYE1Q8NFV5 336 aaPredicted RBP12.1□□□□□ -0.47
SKP2-202ENST00000274255 PIP4K2CQ8TBX8 421 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 NGRNQ9NPE2 291 aaKnown RBP12.1□□□□□ -0.47
SKP2-202ENST00000274255 SLC12A6Q9UHW9 1150 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 PHTF1Q9UMS5 762 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 RGPD1P0DJD0 1748 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 ALDH18A1P54886 795 aaKnown RBP12.1□□□□□ -0.47
SKP2-202ENST00000274255 ITIH3Q06033 890 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 KRT39Q6A163 491 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 GRK7Q8WTQ7 553 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 PRMT6Q96LA8 375 aaPredicted RBP12.1□□□□□ -0.47
SKP2-202ENST00000274255 MCEEQ96PE7 176 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 EXOC7Q9UPT5 735 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 M0R2N6 131 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 NFIBO00712 420 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 SNX3O60493 162 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 CIB2O75838 187 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 TAF1BQ53T94 588 aaPredicted RBP12.1□□□□□ -0.47
SKP2-202ENST00000274255 FITM2Q8N6M3 262 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 LRRC57Q8N9N7 239 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 FBXL13Q8NEE6 735 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 TMEM39BQ9GZU3 492 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 KCNH7Q9NS40 1196 aa12.1□□□□□ -0.47
SKP2-202ENST00000274255 I3L4J1 428 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 CYP11B1P15538 503 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 GNA15P30679 374 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 FASTKD3Q14CZ7 662 aaKnown RBP12.09□□□□□ -0.47
SKP2-202ENST00000274255 PREPLQ4J6C6 727 aaPredicted RBP12.09□□□□□ -0.47
SKP2-202ENST00000274255 ZCWPW2Q504Y3 356 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 DARS2Q6PI48 645 aaKnown RBP12.09□□□□□ -0.47
SKP2-202ENST00000274255 C3orf62Q6ZUJ4 267 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 TMEM179Q6ZVK1 233 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 ARMC2Q8NEN0 867 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 PAGR1Q9BTK6 254 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 TRIM4Q9C037 500 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 TXLNGQ9NUQ3 528 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 TXNDC16Q9P2K2 825 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 INO80B-WBP1J3KQ70 363 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 YWHABP31946 246 aaKnown RBP12.09□□□□□ -0.47
SKP2-202ENST00000274255 CTCFP49711 727 aaPredicted RBP12.09□□□□□ -0.47
SKP2-202ENST00000274255 NXNQ6DKJ4 435 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 CCT6BQ92526 530 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 CFAP57Q96MR6 1250 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 INO80BQ9C086 356 aaPredicted RBP12.09□□□□□ -0.47
SKP2-202ENST00000274255 MYLK2Q9H1R3 596 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 ATRNO75882 1429 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 UBR1Q8IWV7 1749 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 FAM47DPA6NHR8 397 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 POLRMTO00411 1230 aaKnown RBP12.09□□□□□ -0.47
SKP2-202ENST00000274255 AP1G2O75843 785 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 RARGP13631 454 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 GRAMD1BQ3KR37 738 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 ANKRD20A2Q5SQ80 823 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 ANKRD20A1Q5TYW2 823 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 DUPD1Q68J44 220 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 KCTD6Q8NC69 237 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 ZBTB45Q96K62 511 aaPredicted RBP12.09□□□□□ -0.47
SKP2-202ENST00000274255 THTPAQ9BU02 230 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 CDCA7Q9BWT1 371 aaPredicted RBP12.09□□□□□ -0.47
SKP2-202ENST00000274255 FHDC1Q9C0D6 1143 aaPredicted RBP12.09□□□□□ -0.47
SKP2-202ENST00000274255 WNT8AQ9H1J5 351 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 PCNTO95613 3336 aa12.09□□□□□ -0.47
SKP2-202ENST00000274255 A0A1W2PPM1 405 aa12.08□□□□□ -0.47
SKP2-202ENST00000274255 ESYT2A0FGR8 921 aa12.08□□□□□ -0.47
SKP2-202ENST00000274255 CDH16O75309 829 aa12.08□□□□□ -0.47
SKP2-202ENST00000274255 PSMA2P25787 234 aa12.08□□□□□ -0.47
SKP2-202ENST00000274255 QARSP47897 775 aaKnown RBP12.08□□□□□ -0.47
SKP2-202ENST00000274255 BTKQ06187 659 aa12.08□□□□□ -0.47
SKP2-202ENST00000274255 AP3B2Q13367 1082 aa12.08□□□□□ -0.47
SKP2-202ENST00000274255 RCN1Q15293 331 aa12.08□□□□□ -0.47
SKP2-202ENST00000274255 PCNX4Q63HM2 1172 aa12.08□□□□□ -0.47
SKP2-202ENST00000274255 C11orf63Q6NUN7 778 aa12.08□□□□□ -0.47
SKP2-202ENST00000274255 ATL2Q8NHH9 583 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms