RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 NT5DC4Q86YG4 428 aa18.64■□□□□ 0.58
SKP2-201ENST00000274254 HELQQ8TDG4 1101 aa18.64■□□□□ 0.58
SKP2-201ENST00000274254 MTIF3Q9H2K0 278 aaKnown RBP18.64■□□□□ 0.58
SKP2-201ENST00000274254 MIOSQ9NXC5 875 aa18.64■□□□□ 0.58
SKP2-201ENST00000274254 PLAGL2Q9UPG8 496 aa18.64■□□□□ 0.58
SKP2-201ENST00000274254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.64■□□□□ 0.58
SKP2-201ENST00000274254 FNDC1Q4ZHG4 1894 aaPredicted RBP18.64■□□□□ 0.57
SKP2-201ENST00000274254 DGKIO75912 1065 aa18.64■□□□□ 0.57
SKP2-201ENST00000274254 UPP2O95045 317 aa18.64■□□□□ 0.57
SKP2-201ENST00000274254 TMEM132DQ14C87 1099 aa18.64■□□□□ 0.57
SKP2-201ENST00000274254 MIIPQ5JXC2 388 aa18.64■□□□□ 0.57
SKP2-201ENST00000274254 GLRA4Q5JXX5 417 aa18.64■□□□□ 0.57
SKP2-201ENST00000274254 C9orf50Q5SZB4 431 aa18.64■□□□□ 0.57
SKP2-201ENST00000274254 ZNF516Q92618 1163 aa18.64■□□□□ 0.57
SKP2-201ENST00000274254 KIF12Q96FN5 646 aa18.64■□□□□ 0.57
SKP2-201ENST00000274254 CASD1Q96PB1 797 aa18.64■□□□□ 0.57
SKP2-201ENST00000274254 PPP1R10Q96QC0 940 aaKnown RBP18.64■□□□□ 0.57
SKP2-201ENST00000274254 RPS6KC1Q96S38 1066 aa18.64■□□□□ 0.57
SKP2-201ENST00000274254 TMEM117Q9H0C3 514 aa18.64■□□□□ 0.57
SKP2-201ENST00000274254 INTS13Q9NVM9 706 aa18.64■□□□□ 0.57
SKP2-201ENST00000274254 COL4A6Q14031 1691 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 TNNI1P19237 187 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 GTF2H1P32780 548 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 GATMP50440 423 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 SCNN1GP51170 649 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 PPP3CAQ08209 521 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 NAB2Q15742 525 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 NOMO2Q5JPE7 1267 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 TCERG1LQ5VWI1 586 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 LMBRD2Q68DH5 695 aaPredicted RBP18.63■□□□□ 0.57
SKP2-201ENST00000274254 TMCO2Q7Z6W1 182 aaPredicted RBP18.63■□□□□ 0.57
SKP2-201ENST00000274254 ABI1Q8IZP0 508 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 ANKRD20A12PQ8NF67 263 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 OR5B17Q8NGF7 314 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 PHOSPHO2Q8TCD6 241 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 SLC9A7Q96T83 725 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 RC3H2Q9HBD1 1191 aaKnown RBP18.63■□□□□ 0.57
SKP2-201ENST00000274254 INPP5FQ9Y2H2 1132 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 SLC4A7Q9Y6M7 1214 aa18.63■□□□□ 0.57
SKP2-201ENST00000274254 THP07101 528 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 PRKCSHP14314 528 aaPredicted RBP18.62■□□□□ 0.57
SKP2-201ENST00000274254 AP3M2P53677 418 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 TFAMQ00059 246 aaKnown RBP18.62■□□□□ 0.57
SKP2-201ENST00000274254 KCNH2Q12809 1159 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 GRIK3Q13003 919 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 SHHQ15465 462 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 DUOXA2Q1HG44 320 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 VWA3BQ502W6 1294 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 C15orf39Q6ZRI6 1047 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 URGCPQ8TCY9 931 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 ZNF689Q96CS4 500 aaPredicted RBP18.62■□□□□ 0.57
SKP2-201ENST00000274254 FAM84AQ96KN4 292 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 MTMR12Q9C0I1 747 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 TAB2Q9NYJ8 693 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 KANSL3Q9P2N6 904 aa18.62■□□□□ 0.57
SKP2-201ENST00000274254 TDRD15B5MCY1 1934 aaKnown RBP18.62■□□□□ 0.57
SKP2-201ENST00000274254 PMM2O15305 246 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 STX10O60499 249 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 GJB5O95377 273 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 POMCP01189 267 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 C4BPAP04003 597 aaKnown RBP18.61■□□□□ 0.57
SKP2-201ENST00000274254 GCLMP48507 274 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 COPB1P53618 953 aaKnown RBP18.61■□□□□ 0.57
SKP2-201ENST00000274254 FANCCQ00597 558 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 UVSSAQ2YD98 709 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 ZACNQ401N2 412 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 CBWD6Q4V339 395 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 CBWD3Q5JTY5 395 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 CBWD5Q5RIA9 395 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 SV2AQ7L0J3 742 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 CACTINQ8WUQ7 758 aaKnown RBP18.61■□□□□ 0.57
SKP2-201ENST00000274254 C18orf25Q96B23 403 aaPredicted RBP18.61■□□□□ 0.57
SKP2-201ENST00000274254 UBE2OQ9C0C9 1292 aaKnown RBP18.61■□□□□ 0.57
SKP2-201ENST00000274254 NDST4Q9H3R1 872 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 TMEM8AQ9HCN3 771 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 SLC38A7Q9NVC3 462 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 TBC1D13Q9NVG8 400 aa18.61■□□□□ 0.57
SKP2-201ENST00000274254 UBQLN1Q9UMX0 589 aaKnown RBP18.61■□□□□ 0.57
SKP2-201ENST00000274254 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.61■□□□□ 0.57
SKP2-201ENST00000274254 RANBP2P49792 3224 aaKnown RBP18.6■□□□□ 0.57
SKP2-201ENST00000274254 FSD2A1L4K1 749 aa18.6■□□□□ 0.57
SKP2-201ENST00000274254 TULP1O00294 542 aaPredicted RBP18.6■□□□□ 0.57
SKP2-201ENST00000274254 AFPP02771 609 aaKnown RBP18.6■□□□□ 0.57
SKP2-201ENST00000274254 ATP2A2P16615 1042 aaKnown RBP18.6■□□□□ 0.57
SKP2-201ENST00000274254 CYP3A5P20815 502 aa18.6■□□□□ 0.57
SKP2-201ENST00000274254 BMP8BP34820 402 aa18.6■□□□□ 0.57
SKP2-201ENST00000274254 FMO5P49326 533 aa18.6■□□□□ 0.57
SKP2-201ENST00000274254 HTRA4P83105 476 aaPredicted RBP18.6■□□□□ 0.57
SKP2-201ENST00000274254 MLLT1Q03111 559 aaPredicted RBP18.6■□□□□ 0.57
SKP2-201ENST00000274254 SOX4Q06945 474 aaPredicted RBP18.6■□□□□ 0.57
SKP2-201ENST00000274254 TDRD10Q5VZ19 366 aaKnown RBP18.6■□□□□ 0.57
SKP2-201ENST00000274254 HERC6Q8IVU3 1022 aa18.6■□□□□ 0.57
SKP2-201ENST00000274254 CXorf38Q8TB03 319 aa18.6■□□□□ 0.57
SKP2-201ENST00000274254 ANKRD36BP1Q96IX9 119 aa18.6■□□□□ 0.57
SKP2-201ENST00000274254 RNPC3Q96LT9 517 aaKnown RBP18.6■□□□□ 0.57
SKP2-201ENST00000274254 VPS16Q9H269 839 aa18.6■□□□□ 0.57
SKP2-201ENST00000274254 TUBGCP4Q9UGJ1 667 aa18.6■□□□□ 0.57
SKP2-201ENST00000274254 TBKBP1A7MCY6 615 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 LGALS16A8MUM7 142 aa18.59■□□□□ 0.57
SKP2-201ENST00000274254 XPOTO43592 962 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms