RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 RASGRF1Q13972 1273 aa11.12□□□□□ -0.63
OTOF-201ENST00000272371 FAM83BQ5T0W9 1011 aa11.12□□□□□ -0.63
OTOF-201ENST00000272371 RSBN1Q5VWQ0 802 aaPredicted RBP11.12□□□□□ -0.63
OTOF-201ENST00000272371 ARL10Q8N8L6 244 aa11.12□□□□□ -0.63
OTOF-201ENST00000272371 ATAD3AQ9NVI7 634 aa11.12□□□□□ -0.63
OTOF-201ENST00000272371 SMAPO00193 183 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 AP3B1O00203 1094 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 IL12RB1P42701 662 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 CPA2P48052 419 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 CACNA2D1P54289 1103 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 PSMC6P62333 389 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 MXD4Q14582 209 aaPredicted RBP11.11□□□□□ -0.63
OTOF-201ENST00000272371 MAPRE1Q15691 268 aaKnown RBP11.11□□□□□ -0.63
OTOF-201ENST00000272371 CERKLQ49MI3 558 aaPredicted RBP11.11□□□□□ -0.63
OTOF-201ENST00000272371 P3H2Q8IVL5 708 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 RHOT1Q8IXI2 618 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 TRIM51Q9BSJ1 452 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 ROPN1BQ9BZX4 212 aaPredicted RBP11.11□□□□□ -0.63
OTOF-201ENST00000272371 ROPN1Q9HAT0 212 aaPredicted RBP11.11□□□□□ -0.63
OTOF-201ENST00000272371 SARS2Q9NP81 518 aaKnown RBP11.11□□□□□ -0.63
OTOF-201ENST00000272371 PFASO15067 1338 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 MBD5Q9P267 1494 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 C21orf2O43822 256 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 SMAD1Q15797 465 aaKnown RBP11.11□□□□□ -0.63
OTOF-201ENST00000272371 COA7Q96BR5 231 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 MANSC1Q9H8J5 431 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 ROBO2Q9HCK4 1378 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 RASGRP2Q7LDG7 609 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 AKT3Q9Y243 479 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 hCG_1984214I3L0E3 225 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 PHKG2P15735 406 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 TCF3P15923 654 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 CASP1P29466 404 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 PLA2G4AP47712 749 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 CIAPIN1Q6FI81 312 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 CCDC80Q76M96 950 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 LPCAT2Q7L5N7 544 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 ZNF713Q8N859 430 aaPredicted RBP11.11□□□□□ -0.63
OTOF-201ENST00000272371 TNIP2Q8NFZ5 429 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 RFFLQ8WZ73 363 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 DCLRE1BQ9H816 532 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 CDC42BPBQ9Y5S2 1711 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 AP1G2O75843 785 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 OASLQ15646 514 aaKnown RBP11.11□□□□□ -0.63
OTOF-201ENST00000272371 PRUNE1Q86TP1 453 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 SETD3Q86TU7 594 aaPredicted RBP11.11□□□□□ -0.63
OTOF-201ENST00000272371 ZNF496Q96IT1 587 aaPredicted RBP11.11□□□□□ -0.63
OTOF-201ENST00000272371 EGFL8Q99944 293 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 HAO1Q9UJM8 370 aa11.11□□□□□ -0.63
OTOF-201ENST00000272371 FAM32AQ9Y421 112 aaKnown RBP11.11□□□□□ -0.63
OTOF-201ENST00000272371 A0A1W2PQC6 194 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 TAF4O00268 1085 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 IFNAR1P17181 557 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 SLC27A3Q5K4L6 730 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 SIX5Q8N196 739 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 ATL2Q8NHH9 583 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 SLC7A3Q8WY07 619 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 C17orf80Q9BSJ5 609 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 AMNQ9BXJ7 453 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 KRT87PA6NCN2 255 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 NDUFA5Q16718 116 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 SLFN13Q68D06 897 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 RIBC1Q8N443 379 aaPredicted RBP11.1□□□□□ -0.63
OTOF-201ENST00000272371 RNF139Q8WU17 664 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 AIFM3Q96NN9 605 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 PPCSQ9HAB8 311 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 MRGBPQ9NV56 204 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 LIMA1Q9UHB6 759 aaKnown RBP11.1□□□□□ -0.63
OTOF-201ENST00000272371 MAP3K4Q9Y6R4 1608 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 DGKIO75912 1065 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 S100A9P06702 114 aaKnown RBP11.1□□□□□ -0.63
OTOF-201ENST00000272371 COPAP53621 1224 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 CDKL3Q8IVW4 592 aaPredicted RBP11.1□□□□□ -0.63
OTOF-201ENST00000272371 RTL3Q8N8U3 475 aaKnown RBP11.1□□□□□ -0.63
OTOF-201ENST00000272371 HNRNPLLQ8WVV9 542 aaKnown RBP11.1□□□□□ -0.63
OTOF-201ENST00000272371 CEP170P1Q96L14 293 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 SYTL2Q9HCH5 934 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 SPATA2Q9UM82 520 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 IPPQ9Y573 584 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 ARIH2O95376 493 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 TFRCP02786 760 aaKnown RBP11.1□□□□□ -0.63
OTOF-201ENST00000272371 CCNA1P78396 465 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 SGSM1Q2NKQ1 1148 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 P3H1Q32P28 736 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 FGD2Q7Z6J4 655 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 SUGP1Q8IWZ8 645 aaKnown RBP11.1□□□□□ -0.63
OTOF-201ENST00000272371 C19orf18Q8NEA5 215 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 MIEF2Q96C03 454 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 TRAPPC9Q96Q05 1148 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 MXD3Q9BW11 206 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 PCDHGB4Q9UN71 923 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 NR2E3Q9Y5X4 410 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 INO80B-WBP1J3KQ70 363 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 NUP62P37198 522 aaPredicted RBP11.1□□□□□ -0.63
OTOF-201ENST00000272371 MFSD4BQ5TF39 518 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 CENPPQ6IPU0 288 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 MYCBPAPQ8TBZ2 947 aa11.1□□□□□ -0.63
OTOF-201ENST00000272371 IRX2Q9BZI1 471 aaPredicted RBP11.1□□□□□ -0.63
OTOF-201ENST00000272371 INO80BQ9C086 356 aaPredicted RBP11.1□□□□□ -0.63
OTOF-201ENST00000272371 TLR7Q9NYK1 1049 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms