RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 C10orf76Q5T2E6 689 aa13.06□□□□□ -0.32
SDE2-201ENST00000272091 NUB1Q9Y5A7 615 aa13.06□□□□□ -0.32
SDE2-201ENST00000272091 CXCL8P10145 99 aa13.06□□□□□ -0.32
SDE2-201ENST00000272091 ZNF410Q86VK4 478 aa13.06□□□□□ -0.32
SDE2-201ENST00000272091 MAP7D2Q96T17 732 aa13.06□□□□□ -0.32
SDE2-201ENST00000272091 FAM49AQ9H0Q0 323 aaPredicted RBP13.06□□□□□ -0.32
SDE2-201ENST00000272091 TREHO43280 583 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 SRGAP2O75044 1071 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 ALDH1A1P00352 501 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 BIRC3Q13489 604 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 UBR7Q8N806 425 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 AP5M1Q9H0R1 490 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 PDCD11Q14690 1871 aaKnown RBP13.05□□□□□ -0.32
SDE2-201ENST00000272091 SMIM35A0A1B0GVV1 85 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 ZEB2O60315 1214 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 DUSP11O75319 330 aaKnown RBP13.05□□□□□ -0.32
SDE2-201ENST00000272091 FMO1Q01740 532 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 RPUSD2Q8IZ73 545 aaKnown RBP13.05□□□□□ -0.32
SDE2-201ENST00000272091 RNF10Q8N5U6 811 aaKnown RBP13.05□□□□□ -0.32
SDE2-201ENST00000272091 TRIM58Q8NG06 486 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 ANKRD7Q92527 254 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 UPF3AQ9H1J1 476 aaKnown RBP13.05□□□□□ -0.32
SDE2-201ENST00000272091 PCDHGC5Q9Y5F6 944 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 GRID2IPA4D2P6 1211 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 MCF2P10911 925 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 GALCP54803 685 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 GJA9P57773 515 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 RNF186Q9NXI6 227 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 ANO9A1A5B4 782 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 NCK2O43639 380 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 B4GALT4O60513 344 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 MMEP08473 750 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 STAG3L1P0CL83 205 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 CYP2C9P11712 490 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 HOXA11P31270 313 aaPredicted RBP13.05□□□□□ -0.32
SDE2-201ENST00000272091 USP8P40818 1118 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 CACNB2Q08289 660 aaPredicted RBP13.05□□□□□ -0.32
SDE2-201ENST00000272091 HSP90AA2PQ14568 343 aaPredicted RBP13.05□□□□□ -0.32
SDE2-201ENST00000272091 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 FMNL3Q8IVF7 1028 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 CXorf38Q8TB03 319 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 TMEM40Q8WWA1 233 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 CXCL16Q9H2A7 254 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 C1orf112Q9NSG2 853 aa13.05□□□□□ -0.32
SDE2-201ENST00000272091 NCANO14594 1321 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 TRIP11Q15643 1979 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 A0A1B0GUA9 196 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 TMCO5BA8MYB1 307 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 TACC1O75410 805 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 CLTAP09496 248 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 CYP11B1P15538 503 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 NCOA4Q13772 614 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 DEFB115Q30KQ5 88 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 RSRC2Q7L4I2 434 aaKnown RBP13.04□□□□□ -0.32
SDE2-201ENST00000272091 ARHGEF26Q96DR7 871 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 FAM212AQ96EL1 285 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 CITO14578 2027 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 PALMO75781 387 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 NFICP08651 508 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 NKX3-2P78367 333 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 ELF2Q15723 593 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 ERCC6LQ2NKX8 1250 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 TAF3Q5VWG9 929 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 DNAJB3Q8WWF6 145 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 NOX5Q96PH1 765 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 TLR10Q9BXR5 811 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 INTUQ9ULD6 942 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 LACTBL1A8MY62 500 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 ZNF185O15231 689 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 CCDC172P0C7W6 258 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 TNFAIP3P21580 790 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 CCND3P30281 292 aaPredicted RBP13.04□□□□□ -0.32
SDE2-201ENST00000272091 MYL6P60660 151 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 NOP14P78316 857 aaKnown RBP13.04□□□□□ -0.32
SDE2-201ENST00000272091 CUL2Q13617 745 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 VPS36Q86VN1 386 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 LRRC57Q8N9N7 239 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 OSMRQ99650 979 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 XYLT2Q9H1B5 865 aa13.04□□□□□ -0.32
SDE2-201ENST00000272091 PGK1P00558 417 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 ASS1P00966 412 aaKnown RBP13.03□□□□□ -0.32
SDE2-201ENST00000272091 H2AFZP0C0S5 128 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 TMEM132AQ24JP5 1023 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 SLC10A6Q3KNW5 377 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 H2AFVQ71UI9 128 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 ENOSF1Q7L5Y1 443 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 ISCUQ9H1K1 167 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 SIX4Q9UIU6 781 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 CNTN6Q9UQ52 1028 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 JRKLQ9Y4A0 524 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 C6orf222P0C671 652 aaPredicted RBP13.03□□□□□ -0.32
SDE2-201ENST00000272091 AP3M2P53677 418 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 TXLNBQ8N3L3 684 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 CFHR5Q9BXR6 569 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 LUC7LQ9NQ29 371 aaKnown RBP13.03□□□□□ -0.32
SDE2-201ENST00000272091 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 ADAMTS4O75173 837 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 ELNP15502 786 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 MFSD14CQ5VZR4 134 aa13.03□□□□□ -0.32
SDE2-201ENST00000272091 THAP2Q9H0W7 228 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms