RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 IPPQ9Y573 584 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 LRRC53A6NM62 1247 aa24.5■■□□□ 1.51
UFD1-201ENST00000263202 SELPP16109 830 aa24.5■■□□□ 1.51
UFD1-201ENST00000263202 JADE1Q6IE81 842 aa24.5■■□□□ 1.51
UFD1-201ENST00000263202 IQCEQ6IPM2 695 aa24.5■■□□□ 1.51
UFD1-201ENST00000263202 PDXDC1Q6P996 788 aa24.5■■□□□ 1.51
UFD1-201ENST00000263202 LRRC8DQ7L1W4 858 aa24.5■■□□□ 1.51
UFD1-201ENST00000263202 CD302Q8IX05 232 aa24.5■■□□□ 1.51
UFD1-201ENST00000263202 SMG8Q8ND04 991 aaKnown RBP24.5■■□□□ 1.51
UFD1-201ENST00000263202 PLEKHA5Q9HAU0 1116 aa24.5■■□□□ 1.51
UFD1-201ENST00000263202 PRDM10Q9NQV6 1147 aa24.5■■□□□ 1.51
UFD1-201ENST00000263202 TANC1Q9C0D5 1861 aa24.5■■□□□ 1.51
UFD1-201ENST00000263202 HLA-DRAP01903 254 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 NFICP08651 508 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 TFAMQ00059 246 aaKnown RBP24.49■■□□□ 1.51
UFD1-201ENST00000263202 TRAPPC11Q7Z392 1133 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 SNX27Q96L92 541 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 DAAM1Q9Y4D1 1078 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 RECQL4O94761 1208 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 TMEM191BP0C7N4 346 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 ZSCAN20P17040 1043 aaPredicted RBP24.49■■□□□ 1.51
UFD1-201ENST00000263202 PIK3CAP42336 1068 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 YARSP54577 528 aaKnown RBP24.49■■□□□ 1.51
UFD1-201ENST00000263202 DSC3Q14574 896 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 TRIM60Q495X7 471 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 WDR59Q6PJI9 974 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 ARHGEF19Q8IW93 802 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 ANKRD36BP1Q96IX9 119 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 TOX2Q96NM4 488 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 DNAJC12Q9UKB3 198 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 PYCARDQ9ULZ3 195 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 PLAGL2Q9UPG8 496 aa24.49■■□□□ 1.51
UFD1-201ENST00000263202 PITPNM1O00562 1244 aa24.48■■□□□ 1.51
UFD1-201ENST00000263202 NRDCO43847 1150 aa24.48■■□□□ 1.51
UFD1-201ENST00000263202 MGEA5O60502 916 aa24.48■■□□□ 1.51
UFD1-201ENST00000263202 PHACTR2O75167 634 aa24.48■■□□□ 1.51
UFD1-201ENST00000263202 AKAP5P24588 427 aa24.48■■□□□ 1.51
UFD1-201ENST00000263202 HNRNPH3P31942 346 aaKnown RBP24.48■■□□□ 1.51
UFD1-201ENST00000263202 TSR1Q2NL82 804 aaKnown RBP24.48■■□□□ 1.51
UFD1-201ENST00000263202 ALKAL1Q6UXT8 129 aa24.48■■□□□ 1.51
UFD1-201ENST00000263202 TMEM106CQ9BVX2 250 aa24.48■■□□□ 1.51
UFD1-201ENST00000263202 APOL6Q9BWW8 343 aa24.48■■□□□ 1.51
UFD1-201ENST00000263202 NUCKS1Q9H1E3 243 aaKnown RBP24.48■■□□□ 1.51
UFD1-201ENST00000263202 CXCL16Q9H2A7 254 aa24.48■■□□□ 1.51
UFD1-201ENST00000263202 RNF39Q9H2S5 420 aa24.48■■□□□ 1.51
UFD1-201ENST00000263202 FAM105AQ9NUU6 356 aa24.48■■□□□ 1.51
UFD1-201ENST00000263202 PCDHB2Q9Y5E7 798 aa24.48■■□□□ 1.51
UFD1-201ENST00000263202 DCDC2CA8MYV0 355 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 ZC3H11AO75152 810 aaKnown RBP eCLIP24.47■■□□□ 1.51
UFD1-201ENST00000263202 TNNC2P02585 160 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 RFX1P22670 979 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 JAM2P57087 298 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 FAAP100Q0VG06 881 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 MEA1Q16626 185 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 E4F1Q66K89 784 aaPredicted RBP24.47■■□□□ 1.51
UFD1-201ENST00000263202 SCARA3Q6AZY7 606 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 PAWRQ96IZ0 340 aaKnown RBP24.47■■□□□ 1.51
UFD1-201ENST00000263202 PI4K2AQ9BTU6 479 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 MCOLN1Q9GZU1 580 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 C11orf49Q9H6J7 331 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.47■■□□□ 1.514e-7■■■■■ 46.9
UFD1-201ENST00000263202 C2CD2Q9Y426 696 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 CST3P01034 146 aaPredicted RBP24.47■■□□□ 1.51
UFD1-201ENST00000263202 TLE2Q04725 743 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 RAPGEF1Q13905 1077 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 TMEM132DQ14C87 1099 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 ZSCAN30Q86W11 494 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 NT5DC4Q86YG4 428 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 NT5C1BQ96P26 610 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 SPAG5Q96R06 1193 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 TRAIPQ9BWF2 469 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 MYO6Q9UM54 1294 aa24.47■■□□□ 1.51
UFD1-201ENST00000263202 CAPN2P17655 700 aa24.46■■□□□ 1.51
UFD1-201ENST00000263202 NCOA4Q13772 614 aa24.46■■□□□ 1.51
UFD1-201ENST00000263202 SYN2Q92777 582 aaPredicted RBP24.46■■□□□ 1.51
UFD1-201ENST00000263202 ELMO3Q96BJ8 720 aa24.46■■□□□ 1.51
UFD1-201ENST00000263202 STK33Q9BYT3 514 aa24.46■■□□□ 1.51
UFD1-201ENST00000263202 UBE2TQ9NPD8 197 aaPredicted RBP24.46■■□□□ 1.51
UFD1-201ENST00000263202 ZNHIT6Q9NWK9 470 aaKnown RBP24.46■■□□□ 1.51
UFD1-201ENST00000263202 CNTN3Q9P232 1028 aa24.46■■□□□ 1.51
UFD1-201ENST00000263202 PARP2Q9UGN5 583 aa24.46■■□□□ 1.51
UFD1-201ENST00000263202 DERAQ9Y315 318 aa24.46■■□□□ 1.51
UFD1-201ENST00000263202 SCN5AQ14524 2016 aa24.45■■□□□ 1.51
UFD1-201ENST00000263202 SFMBT2Q5VUG0 894 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 HELQQ8TDG4 1101 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 TATDN2Q93075 761 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 KIF12Q96FN5 646 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 ZMAT2Q96NC0 199 aaKnown RBP24.45■■□□□ 1.5
UFD1-201ENST00000263202 CHP1Q99653 195 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 ADAM2Q99965 735 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 IFIH1Q9BYX4 1025 aaKnown RBP24.45■■□□□ 1.5
UFD1-201ENST00000263202 UMODL1Q5DID0 1318 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 DRAP1Q14919 205 aaPredicted RBP24.45■■□□□ 1.5
UFD1-201ENST00000263202 GPNMBQ14956 572 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 XKR4Q5GH76 650 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 WDR44Q5JSH3 913 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 CYP26C1Q6V0L0 522 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 TMTC1Q8IUR5 882 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 C1orf127Q8N9H9 656 aa24.45■■□□□ 1.5
UFD1-201ENST00000263202 GPR88Q9GZN0 384 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms