RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 RRM1P23921 792 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 YWHAGP61981 247 aaKnown RBP eCLIP16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 DYNC1I2Q13409 638 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 C11orf91Q3C1V1 193 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 ZCWPW2Q504Y3 356 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 SLC47A2Q86VL8 602 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 ARHGAP24Q8N264 748 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 OPTNQ96CV9 577 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 BICD1Q96G01 975 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 CFAP57Q96MR6 1250 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 C11orf70Q9BRQ4 267 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 ARL8BQ9NVJ2 186 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 CNOT7Q9UIV1 285 aaKnown RBP16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 AGTPBP1Q9UPW5 1226 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 C4AP0C0L4 1744 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 C4BP0C0L5 1744 aa16.89■□□□□ 0.29
PRPF40B-201ENST00000261897 AKR1B1P15121 316 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 PTPN4P29074 926 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 TPP2P29144 1249 aaPredicted RBP16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 CACNB3P54284 484 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 MKRN3Q13064 507 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 GIT2Q14161 759 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 SGSM1Q2NKQ1 1148 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 MFSD14BQ5SR56 506 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 BAZ2AQ9UIF9 1905 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 MAGEA13PA6NCF6 341 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 EDRF1Q3B7T1 1238 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 PHC3Q8NDX5 983 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 RFWD2Q8NHY2 731 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 ASAP3Q8TDY4 903 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 GRAMD1AQ96CP6 724 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 RBM41Q96IZ5 413 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 CRAMP1Q96RY5 1269 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 PI4K2AQ9BTU6 479 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 NEU2Q9Y3R4 380 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 TBX10O75333 385 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 FASTKD3Q14CZ7 662 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 SLC1A5Q15758 541 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 PARP10Q53GL7 1025 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 RABGAP1LQ5R372 815 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 PCMTD2Q9NV79 361 aa16.88■□□□□ 0.29
PRPF40B-201ENST00000261897 CES2O00748 559 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 CHRNB2P17787 502 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 IL6STP40189 918 aaPredicted RBP16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 MXI1P50539 228 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 ARSEP51690 589 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 ACSBG2Q5FVE4 666 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 PCNX4Q63HM2 1172 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 ZDHHC14Q8IZN3 488 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 RIBC1Q8N443 379 aaPredicted RBP16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 PREBQ9HCU5 417 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 WDR35Q9P2L0 1181 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 R3HDM2Q9Y2K5 976 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 LTN1O94822 1766 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 A6NJR5 290 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 PDXKO00764 312 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 MT-ND3P03897 115 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 DLG4P78352 724 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 BASP1P80723 227 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 PPATQ06203 517 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 ARSHQ5FYA8 562 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 IRGCQ6NXR0 463 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 ARHGEF19Q8IW93 802 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 GRK7Q8WTQ7 553 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 PYROXD1Q8WU10 500 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 PYDC1Q8WXC3 89 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 TRAIPQ9BWF2 469 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 PARVGQ9HBI0 331 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 ZNF219Q9P2Y4 722 aaPredicted RBP16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 MYO5AQ9Y4I1 1855 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 LOC100653049A0A140TA62 436 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 A6NHS1 94 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 KRT34O76011 436 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 PTGIRP43119 386 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 BFSP1Q12934 665 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 OTOAQ7RTW8 1153 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 ZNF34Q8IZ26 560 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 DAGLBQ8NCG7 672 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 WDR66Q8TBY9 1149 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 WDR60Q8WVS4 1066 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 USP6NLQ92738 828 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 TSSK1BQ9BXA7 367 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 LARSQ9P2J5 1176 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 LNPEPQ9UIQ6 1025 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 DIS3Q9Y2L1 958 aaKnown RBP16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 SH3BP1Q9Y3L3 701 aa16.87■□□□□ 0.29
PRPF40B-201ENST00000261897 I3L4J1 428 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 LMNAP02545 664 aaKnown RBP16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 GSTO1P78417 241 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 TMPRSS15P98073 1019 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 ARHGAP4P98171 946 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 SLC34A1Q06495 639 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 AGR3Q8TD06 166 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 FAM111AQ96PZ2 611 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 ANGPTL2Q9UKU9 493 aa16.86■□□□□ 0.29
PRPF40B-201ENST00000261897 TJP3O95049 919 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms