RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 GRIN1Q05586 938 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 TBX2Q13207 712 aaPredicted RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 G3BP1Q13283 466 aaKnown RBP eCLIP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 MCMDC2Q4G0Z9 681 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 USP39Q53GS9 565 aaKnown RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 PLEKHG4Q58EX7 1191 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 EGFLAMQ63HQ2 1017 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 STYK1Q6J9G0 422 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 TMCO3Q6UWJ1 677 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 DPP8Q6V1X1 898 aaPredicted RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 CCDC73Q6ZRK6 1079 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 CXXC5Q7LFL8 322 aaKnown RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 GPR155Q7Z3F1 870 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 DRC7Q8IY82 874 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 C17orf53Q8N3J3 647 aaPredicted RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 SYNPOQ8N3V7 929 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 TRIML1Q8N9V2 468 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 SPC24Q8NBT2 197 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 LINC00301Q8NCQ3 95 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 NSUN7Q8NE18 718 aaKnown RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 FBXO18Q8NFZ0 1043 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 GOLGA5Q8TBA6 731 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 IP6K1Q92551 441 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 EAF2Q96CJ1 260 aaPredicted RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 KAZALD1Q96I82 304 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 PPP1R13BQ96KQ4 1090 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 C16orf45Q96MC5 204 aaPredicted RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 SRPK1Q96SB4 655 aaKnown RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 IER2Q9BTL4 223 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 NAA15Q9BXJ9 866 aaKnown RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 ZNF703Q9H7S9 590 aaPredicted RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 DDX21Q9NR30 783 aaKnown RBP eCLIP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 CWC15Q9P013 229 aaKnown RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 C11orf21Q9P2W6 132 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 MYO1AQ9UBC5 1043 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 PPARGC1AQ9UBK2 798 aaKnown RBP4.28□□□□□ -1.72
CDRT1-201ENST00000261644 FBXO10Q9UK96 956 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 DSEQ9UL01 958 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 HPSEQ9Y251 543 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 MYH15Q9Y2K3 1946 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 LMO7Q8WWI1 1683 aa4.28□□□□□ -1.72
CDRT1-201ENST00000261644 CARMIL3Q8ND23 1372 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 PALLDQ8WX93 1383 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 PMS2P1A4D2B8 440 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 PI4KAP2A4QPH2 592 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 VPS37CA5D8V6 355 aaPredicted RBP4.27□□□□□ -1.73
CDRT1-201ENST00000261644 ACOT7O00154 380 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 WNT9AO14904 365 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 CTDNEP1O95476 244 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 ACO1P21399 889 aaKnown RBP4.27□□□□□ -1.73
CDRT1-201ENST00000261644 SFPQP23246 707 aaKnown RBP eCLIP4.27□□□□□ -1.73
CDRT1-201ENST00000261644 HOXC9P31274 260 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 RPS19P39019 145 aaKnown RBP4.27□□□□□ -1.73
CDRT1-201ENST00000261644 RFX5P48382 616 aaPredicted RBP4.27□□□□□ -1.73
CDRT1-201ENST00000261644 RCAN1P53805 252 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 INHBCP55103 352 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 HNRNPH2P55795 449 aaKnown RBP4.27□□□□□ -1.73
CDRT1-201ENST00000261644 SETQ01105 290 aaPredicted RBP4.27□□□□□ -1.73
CDRT1-201ENST00000261644 DBPQ10586 325 aaPredicted RBP4.27□□□□□ -1.73
CDRT1-201ENST00000261644 SLC39A14Q15043 492 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 NRN1LQ496H8 165 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 PHF19Q5T6S3 580 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 EMC10Q5UCC4 262 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 IGFL4Q6B9Z1 124 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 ARMCX5Q6P1M9 558 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 ZNF575Q86XF7 245 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 VSTM4Q8IW00 320 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 PI4KAP1Q8N8J0 262 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 MSANTD4Q8NCY6 345 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 SPATA20Q8TB22 786 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 MRPS27Q92552 414 aaKnown RBP4.27□□□□□ -1.73
CDRT1-201ENST00000261644 RUBCNQ92622 972 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 CCDC51Q96ER9 411 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 CEP89Q96ST8 783 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 TACO1Q9BSH4 297 aaKnown RBP4.27□□□□□ -1.73
CDRT1-201ENST00000261644 FUT8Q9BYC5 575 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 TRIM8Q9BZR9 551 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 HSD3B7Q9H2F3 369 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 IL1RAPL2Q9NP60 686 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 KLHL42Q9P2K6 505 aa4.27□□□□□ -1.73
CDRT1-201ENST00000261644 SLIT3O75094 1523 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 FAM221BA6H8Z2 402 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 IQCA1LA6NCM1 817 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 SRRM3A6NNA2 597 aaPredicted RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 FAM47E-STBD1D6RA91 191 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 MATN2O00339 956 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 PLSCR1O15162 318 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 NKRFO15226 690 aaKnown RBP eCLIP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 PEX14O75381 377 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 GJB6O95452 261 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 LTFP02788 710 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 SLC3A2P08195 630 aaKnown RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 ZNF18P17022 549 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 CAPN2P17655 700 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 MCM3P25205 808 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 PDIA3P30101 505 aaKnown RBP4.26□□□□□ -1.73
CDRT1-201ENST00000261644 ACTN2P35609 894 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 KCNJ4P48050 445 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 GLRBP48167 497 aa4.26□□□□□ -1.73
CDRT1-201ENST00000261644 AMPHP49418 695 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms