RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 UPP2O95045 317 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 KCNE1P15382 129 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 TNNI1P19237 187 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 KCNJ6P48051 423 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 GATMP50440 423 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 COPB1P53618 953 aaKnown RBP17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 FANCCQ00597 558 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 KCNH2Q12809 1159 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 USP37Q86T82 979 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 WDR49Q8IV35 697 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 TMEM130Q8N3G9 435 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 HERVK_113Q902F9 699 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 KIF12Q96FN5 646 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 VPS16Q9H269 839 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 MMRN2Q9H8L6 949 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 INPP5FQ9Y2H2 1132 aa17.12■□□□□ 0.33
CCDC90B-201ENST00000260054 GOLGA6L3A6NEY3 463 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 H0YGN5 161 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 INPPL1O15357 1258 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 SERPINC1P01008 464 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 GCLMP48507 274 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 SCNN1GP51170 649 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 GSE1Q14687 1217 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 TMEM132DQ14C87 1099 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 ZBTB6Q15916 424 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 VWA3BQ502W6 1294 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 GLB1LQ6UWU2 654 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 NAP1L5Q96NT1 182 aaPredicted RBP17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 RPS6KC1Q96S38 1066 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 MTMR12Q9C0I1 747 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 NDST4Q9H3R1 872 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 INTS13Q9NVM9 706 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 C2CD2Q9Y426 696 aa17.11■□□□□ 0.33
CCDC90B-201ENST00000260054 POMCP01189 267 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 AFPP02771 609 aaKnown RBP17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 TFAMQ00059 246 aaKnown RBP17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 UVSSAQ2YD98 709 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 CBWD6Q4V339 395 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 CBWD3Q5JTY5 395 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 CBWD5Q5RIA9 395 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 C9orf50Q5SZB4 431 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 C18orf25Q96B23 403 aaPredicted RBP17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 CASD1Q96PB1 797 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 PPP1R10Q96QC0 940 aaKnown RBP17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 TMEM117Q9H0C3 514 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 DERAQ9Y315 318 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 FMO5P49326 533 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 GUCY2FP51841 1108 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 PLCB2Q00722 1185 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 NAB2Q15742 525 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 NOMO2Q5JPE7 1267 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 SCARA3Q6AZY7 606 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 FAM117BQ6P1L5 589 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 C15orf39Q6ZRI6 1047 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 SV2AQ7L0J3 742 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 NT5DC4Q86YG4 428 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 GDF15Q99988 308 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 TUBGCP4Q9UGJ1 667 aa17.1■□□□□ 0.33
CCDC90B-201ENST00000260054 PDCD11Q14690 1871 aaKnown RBP17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 PTPRSQ13332 1948 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 A0A1B0GTH6 734 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 PES1O00541 588 aaKnown RBP17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 HOXA2O43364 376 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 STX10O60499 249 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 DGKIO75912 1065 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 C4BPAP04003 597 aaKnown RBP17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 THP07101 528 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 TMEM191BP0C7N4 346 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 GTF2H1P32780 548 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 MXI1P50539 228 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 SOX4Q06945 474 aaPredicted RBP17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 DUOXA2Q1HG44 320 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 ZACNQ401N2 412 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 RASIP1Q5U651 963 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 TDRD10Q5VZ19 366 aaKnown RBP17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 ABI1Q8IZP0 508 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 C1orf127Q8N9H9 656 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 TSPAN18Q96SJ8 248 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 GRPEL1Q9HAV7 217 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 TMEM8AQ9HCN3 771 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 RTN4Q9NQC3 1192 aaKnown RBP17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 IFNKQ9P0W0 207 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 COL4A6Q14031 1691 aa17.09■□□□□ 0.33
CCDC90B-201ENST00000260054 LAMA2P24043 3122 aaKnown RBP17.08■□□□□ 0.33
CCDC90B-201ENST00000260054 TBKBP1A7MCY6 615 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 LGALS16A8MUM7 142 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 TPM2P07951 284 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 AP3M2P53677 418 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 UBASH3AP57075 661 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 GRIK3Q13003 919 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 SHHQ15465 462 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 KRT39Q6A163 491 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 SARM1Q6SZW1 724 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 TRAPPC11Q7Z392 1133 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 CACTINQ8WUQ7 758 aaKnown RBP17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 ANKRD36BP1Q96IX9 119 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 RC3H2Q9HBD1 1191 aaKnown RBP17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 GOLGA2P5Q9HBQ8 144 aa17.08■□□□□ 0.32
CCDC90B-201ENST00000260054 TBC1D13Q9NVG8 400 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms