RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 BOLA3Q53S33 107 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 SNX30Q5VWJ9 437 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 GPAT2Q6NUI2 795 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 SHC4Q6S5L8 630 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 GADL1Q6ZQY3 521 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 MAEAQ7L5Y9 396 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 DDX42Q86XP3 938 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCNA1-201ENST00000255465 WDR75Q8IWA0 830 aaKnown RBP12.59□□□□□ -0.39
CCNA1-201ENST00000255465 ZNF444Q8N0Y2 327 aaPredicted RBP12.59□□□□□ -0.39
CCNA1-201ENST00000255465 LSMEM2Q8N112 164 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 CCDC110Q8TBZ0 833 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 SCG3Q8WXD2 468 aaKnown RBP12.59□□□□□ -0.39
CCNA1-201ENST00000255465 USP6NLQ92738 828 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 DUSP9Q99956 384 aaKnown RBP12.59□□□□□ -0.39
CCNA1-201ENST00000255465 TPK1Q9H3S4 243 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 DNAJB4Q9UDY4 337 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 STXBP5LQ9Y2K9 1186 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 TSC22D4Q9Y3Q8 395 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 TACC3Q9Y6A5 838 aa12.59□□□□□ -0.39
CCNA1-201ENST00000255465 A0A088AWK7 358 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 C19orf81C9J6K1 198 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 DTNBO60941 627 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 PYGMP11217 842 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 CDK4P11802 303 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 LBX1P52954 281 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 HAND2P61296 217 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 CTAG1AP78358 180 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 DHX9Q08211 1270 aaKnown RBP12.58□□□□□ -0.4
CCNA1-201ENST00000255465 DGKZQ13574 1117 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 UAP1Q16222 522 aaPredicted RBP12.58□□□□□ -0.4
CCNA1-201ENST00000255465 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCNA1-201ENST00000255465 SLC43A3Q8NBI5 491 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 ACER1Q8TDN7 264 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 UTP4Q969X6 686 aaKnown RBP12.58□□□□□ -0.4
CCNA1-201ENST00000255465 DDX23Q9BUQ8 820 aaKnown RBP12.58□□□□□ -0.4
CCNA1-201ENST00000255465 TMEM109Q9BVC6 243 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 CFHR5Q9BXR6 569 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 UNKQ9C0B0 810 aaKnown RBP12.58□□□□□ -0.4
CCNA1-201ENST00000255465 R3HDMLQ9H3Y0 253 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 ETNK1Q9HBU6 452 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 POLD4Q9HCU8 107 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 RBM12Q9NTZ6 932 aaKnown RBP12.58□□□□□ -0.4
CCNA1-201ENST00000255465 RASAL2Q9UJF2 1139 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCNA1-201ENST00000255465 ZNF711Q9Y462 761 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 SNX9Q9Y5X1 595 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 UMODL1Q5DID0 1318 aa12.58□□□□□ -0.4
CCNA1-201ENST00000255465 CCDC169A6NNP5 214 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 FGRP09769 529 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 NUDT17P0C025 328 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 GRM2Q14416 872 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 FXNQ16595 210 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 KRT71Q3SY84 523 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 LRRC74BQ6ZQY2 392 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 TMTC3Q6ZXV5 915 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 DHX32Q7L7V1 743 aaKnown RBP12.57□□□□□ -0.4
CCNA1-201ENST00000255465 CLEC10AQ8IUN9 316 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 SIAH1Q8IUQ4 282 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 KIF2BQ8N4N8 673 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 ACMSDQ8TDX5 336 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 STARD8Q92502 1023 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 UBAC1Q9BSL1 405 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 SH2D4AQ9H788 454 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 TRPC7Q9HCX4 862 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 MAGEC2Q9UBF1 373 aaPredicted RBP12.57□□□□□ -0.4
CCNA1-201ENST00000255465 ZMAT5Q9UDW3 170 aaKnown RBP12.57□□□□□ -0.4
CCNA1-201ENST00000255465 A0A1W2PRG0 241 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 PDHXO00330 501 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 ZNF213O14771 459 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 NDC80O14777 642 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 AP1G1O43747 822 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 STK10O94804 968 aaKnown RBP12.57□□□□□ -0.4
CCNA1-201ENST00000255465 MATR3P43243 847 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCNA1-201ENST00000255465 COPB1P53618 953 aaKnown RBP12.57□□□□□ -0.4
CCNA1-201ENST00000255465 CRHR2Q13324 411 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 SPA17Q15506 151 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 TAF1CQ15572 869 aaPredicted RBP12.57□□□□□ -0.4
CCNA1-201ENST00000255465 SEPT7Q16181 437 aaKnown RBP12.57□□□□□ -0.4
CCNA1-201ENST00000255465 ARL13BQ3SXY8 428 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 TREML2Q5T2D2 321 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 BTNL9Q6UXG8 535 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 SFR1Q86XK3 245 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 ZNF579Q8NAF0 562 aaKnown RBP12.57□□□□□ -0.4
CCNA1-201ENST00000255465 NELFBQ8WX92 580 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 MED15Q96RN5 788 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 CHP1Q99653 195 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 KIAA1683Q9H0B3 1180 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 KANSL2Q9H9L4 492 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 PARVGQ9HBI0 331 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 KLHL14Q9P2G3 628 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 STX18Q9P2W9 335 aaKnown RBP12.57□□□□□ -0.4
CCNA1-201ENST00000255465 SEC63Q9UGP8 760 aaKnown RBP12.57□□□□□ -0.4
CCNA1-201ENST00000255465 MTUS1Q9ULD2 1270 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 AGTPBP1Q9UPW5 1226 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 USH1CQ9Y6N9 552 aa12.57□□□□□ -0.4
CCNA1-201ENST00000255465 hCG_2014768A0A024R1R8 64 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 ARHGAP10A1A4S6 786 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 TNFRSF10AO00220 468 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 SPATA31D3P0C874 917 aa12.56□□□□□ -0.4
CCNA1-201ENST00000255465 PTPAQ15257 358 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms