RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 MIS18BP1Q6P0N0 1132 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ZBED8Q8IZ13 594 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ATP11CQ8NB49 1132 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 LNX1Q8TBB1 728 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ZNF277Q9NRM2 450 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 SLC26A4O43511 780 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 RFX1P22670 979 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ALDH18A1P54886 795 aaKnown RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 EIF3EP60228 445 aaKnown RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 KRT76Q01546 638 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ZNF699Q32M78 642 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 DCLK2Q8N568 766 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 GSDMBQ8TAX9 411 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 TATDN2Q93075 761 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 MCEEQ96PE7 176 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ATP6V0A4Q9HBG4 840 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 NYAP2Q9P242 653 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 TBX20Q9UMR3 447 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 USP20Q9Y2K6 914 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 COL5A2P05997 1499 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 A6NJR5 290 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 RGS7P49802 495 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 SLC12A3P55017 1021 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 NOP14P78316 857 aaKnown RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 RNASELQ05823 741 aaKnown RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 MAP3K21Q5TCX8 1036 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 RNF169Q8NCN4 708 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 DEPDC1BQ8WUY9 529 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 NSMCE1Q8WV22 266 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 TBC1D22BQ9NU19 505 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 AKT3Q9Y243 479 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 SPATA31A1Q5TZJ5 1347 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 MST1RQ04912 1400 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 TULP2O00295 520 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 DCTN3O75935 186 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 CDH6P55285 790 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SNRNP35Q16560 246 aaKnown RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 ZNF568Q3ZCX4 644 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 RAPH1Q70E73 1250 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 NCAPG2Q86XI2 1143 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 FEZF2Q8TBJ5 459 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 FAM161BQ96MY7 647 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 MTMR9Q96QG7 549 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 MARCOQ9UEW3 520 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 AGO2Q9UKV8 859 aaKnown RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SLC4A7Q9Y6M7 1214 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 CCDC88AQ3V6T2 1871 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 C21orf2O43822 256 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 PGM1P36871 562 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 ZNF667Q5HYK9 610 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 FAXCQ5TGI0 409 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 FAM84AQ96KN4 292 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 CRAMP1Q96RY5 1269 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 RPF1Q9H9Y2 349 aaKnown RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 CHMP2BQ9UQN3 213 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SDK1Q7Z5N4 2213 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 B2RBV5 119 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 YWHABP31946 246 aaKnown RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SLC8A3P57103 927 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 FAM102AQ5T9C2 384 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SYDE1Q6ZW31 735 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TMEM39BQ9GZU3 492 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 UBN1Q9NPG3 1134 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TAS2R14Q9NYV8 317 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 XPO7Q9UIA9 1087 aaKnown RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 ZBTB12Q9Y330 459 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TMEM150BA6NC51 233 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TBX3O15119 743 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 RPS6KA2Q15349 733 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 DUOXA2Q1HG44 320 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 LVRNQ6Q4G3 990 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 RCOR2Q8IZ40 523 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SLC35C1Q96A29 364 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TRIM55Q9BYV6 548 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 VPS11Q9H270 941 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 VCX3BQ9H321 246 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SALL4Q9UJQ4 1053 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 BCL9O00512 1426 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TLR2O60603 784 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SEPT6Q14141 434 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 STAT4Q14765 748 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 QPCTQ16769 361 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 KRT27Q7Z3Y8 459 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 RHPN2Q8IUC4 686 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 GPD1LQ8N335 351 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 DNAAF3Q8N9W5 541 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 ARMC2Q8NEN0 867 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SPIRE2Q8WWL2 714 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 FAM49AQ9H0Q0 323 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 ACP6Q9NPH0 428 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 FAM53CQ9NYF3 392 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TISP43B9A030 160 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 UBE4BO95155 1302 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 CDR2Q01850 454 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 CBWD6Q4V339 395 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 CBWD3Q5JTY5 395 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 CBWD5Q5RIA9 395 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 NME8Q8N427 588 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 FAM149B1Q96BN6 582 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms