RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 SEPT12Q8IYM1 358 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 PSPC1Q8WXF1 523 aaKnown RBP20.96■□□□□ 0.95
SOX4-201ENST00000244745 ERP44Q9BS26 406 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 SMG5Q9UPR3 1016 aaKnown RBP20.96■□□□□ 0.95
SOX4-201ENST00000244745 KIF9Q9HAQ2 790 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 COL3A1P02461 1466 aaPredicted RBP20.96■□□□□ 0.95
SOX4-201ENST00000244745 SLC37A4O43826 429 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 HNRNPCL1O60812 293 aaKnown RBP20.96■□□□□ 0.95
SOX4-201ENST00000244745 SENP7Q9BQF6 1050 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 TSSK1BQ9BXA7 367 aa20.96■□□□□ 0.95
SOX4-201ENST00000244745 ASAP2O43150 1006 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 PYGBP11216 843 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 DPY19L2Q6NUT2 758 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 TPCN2Q8NHX9 752 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 VPS39Q96JC1 886 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 ANKZF1Q9H8Y5 726 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 SENP1Q9P0U3 644 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 NME3Q13232 169 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 SNRNP35Q16560 246 aaKnown RBP20.95■□□□□ 0.94
SOX4-201ENST00000244745 NBPF3Q9H094 633 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 JMJD4Q9H9V9 463 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 CAPN6Q9Y6Q1 641 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 KCNN4O15554 427 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 ITGA8P53708 1063 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 ERP27Q96DN0 273 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 CEP19Q96LK0 163 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 WARS2Q9UGM6 360 aaKnown RBP20.95■□□□□ 0.94
SOX4-201ENST00000244745 POU5F1BQ06416 359 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 NFIXQ14938 502 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 PPP1R36Q96LQ0 422 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 MCEEQ96PE7 176 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 ABCF3Q9NUQ8 709 aa20.95■□□□□ 0.94
SOX4-201ENST00000244745 KCNJ1P48048 391 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 PCYT1AP49585 367 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 GRB10Q13322 594 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 HIC1Q14526 733 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 BARGINQ6ZT62 677 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 L3MBTL1Q9Y468 752 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 PCDHA10Q9Y5I2 948 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 MAP2P11137 1827 aaKnown RBP20.94■□□□□ 0.94
SOX4-201ENST00000244745 FAM47DPA6NHR8 397 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 ACOT2P49753 483 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 TTLL6Q8N841 843 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 SLC26A4O43511 780 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 ABI1Q8IZP0 508 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 CDC26Q8NHZ8 85 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 WWP1Q9H0M0 922 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 C2orf40Q9H1Z8 148 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 PSMC3IPQ9P2W1 217 aaPredicted RBP20.94■□□□□ 0.94
SOX4-201ENST00000244745 XPO7Q9UIA9 1087 aaKnown RBP20.94■□□□□ 0.94
SOX4-201ENST00000244745 ALG6Q9Y672 507 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 NRXN1Q9ULB1 1477 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 CDH16O75309 829 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 SLC29A2Q14542 456 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 CRYMQ14894 314 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 RARS2Q5T160 578 aaKnown RBP20.94■□□□□ 0.94
SOX4-201ENST00000244745 PRPF38AQ8NAV1 312 aaKnown RBP20.94■□□□□ 0.94
SOX4-201ENST00000244745 TBC1D16Q8TBP0 767 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 TBX3O15119 743 aa20.94■□□□□ 0.94
SOX4-201ENST00000244745 SF3B3Q15393 1217 aaKnown RBP20.94■□□□□ 0.94
SOX4-201ENST00000244745 TYW5A2RUC4 315 aaKnown RBP20.93■□□□□ 0.94
SOX4-201ENST00000244745 FOXP2O15409 715 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 UBTFL6P0CB48 400 aaPredicted RBP20.93■□□□□ 0.94
SOX4-201ENST00000244745 OLFML2BQ68BL8 750 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.93■□□□□ 0.94
SOX4-201ENST00000244745 CCDC124Q96CT7 223 aaKnown RBP20.93■□□□□ 0.94
SOX4-201ENST00000244745 WRNIP1Q96S55 665 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 MYO3BQ8WXR4 1341 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 PAPOLAP51003 745 aaKnown RBP20.93■□□□□ 0.94
SOX4-201ENST00000244745 EZH2Q15910 746 aaKnown RBP20.93■□□□□ 0.94
SOX4-201ENST00000244745 SGSM3Q96HU1 749 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 HOXC10Q9NYD6 342 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 TYK2P29597 1187 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 CIITAP33076 1130 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 SP8Q8IXZ3 490 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 DIP2CQ9Y2E4 1556 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 NTSR2O95665 410 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 EFTUD2Q15029 972 aaKnown RBP eCLIP20.93■□□□□ 0.94
SOX4-201ENST00000244745 KYNUQ16719 465 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 LRRC36Q1X8D7 754 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 MYCBPAPQ8TBZ2 947 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 RAPGEF5Q92565 580 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 EIF3DO15371 548 aaKnown RBP eCLIP20.93■□□□□ 0.94
SOX4-201ENST00000244745 DUOXA2Q1HG44 320 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 DAGLBQ8NCG7 672 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 BEST2Q8NFU1 509 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 PACSIN1Q9BY11 444 aa20.93■□□□□ 0.94
SOX4-201ENST00000244745 ZBTB41Q5SVQ8 909 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 CATSPER3Q86XQ3 398 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 TMEM51Q9NW97 253 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 DLGAP2Q9P1A6 1054 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 SPDYE2BA6NHP3 402 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 SPDYE6P0CI01 402 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 LCP1P13796 627 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 COILP38432 576 aaPredicted RBP20.92■□□□□ 0.94
SOX4-201ENST00000244745 MRPS35P82673 323 aaKnown RBP20.92■□□□□ 0.94
SOX4-201ENST00000244745 FOXD4Q12950 439 aaPredicted RBP20.92■□□□□ 0.94
SOX4-201ENST00000244745 PAPD7Q5XG87 772 aaKnown RBP20.92■□□□□ 0.94
SOX4-201ENST00000244745 THAP2Q9H0W7 228 aa20.92■□□□□ 0.94
SOX4-201ENST00000244745 L1RE1Q9UN81 338 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms