RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 EDEM1Q92611 657 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 RABGGTAQ92696 567 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 INTS4Q96HW7 963 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 INPP4AQ96PE3 977 aaPredicted RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 NCOA5Q9HCD5 579 aaKnown RBP3.95□□□□□ -1.78
UFM1-201ENST00000239878 TRPV5Q9NQA5 729 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 RNF146Q9NTX7 359 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 GALNT8Q9NY28 637 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 GTF2A1LQ9UNN4 478 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 Q9Y3F1 56 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 L3MBTL1Q9Y468 752 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 UBIAD1Q9Y5Z9 338 aa3.95□□□□□ -1.78
UFM1-201ENST00000239878 ATXN2Q99700 1313 aaKnown RBP3.94□□□□□ -1.78
UFM1-201ENST00000239878 A0A1B0GVL5 298 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 E2F8A0AVK6 867 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 ANO9A1A5B4 782 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 PDLIM1O00151 329 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 ZSCAN12O43309 604 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 ADCY3O60266 1144 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 KIF5CO60282 957 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 PPFIA3O75145 1194 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 ADAMTS4O75173 837 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 MICAL2O94851 1124 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 HMGCRP04035 888 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 CCDC175P0C221 793 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 FLT3LGP49771 235 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 BPIFB4P59827 614 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 MRPS9P82933 396 aaKnown RBP3.94□□□□□ -1.78
UFM1-201ENST00000239878 PLOD1Q02809 727 aaPredicted RBP3.94□□□□□ -1.78
UFM1-201ENST00000239878 SEPT6Q14141 434 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 POSTNQ15063 836 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 SPRED3Q2MJR0 410 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 MRM1Q6IN84 353 aaKnown RBP3.94□□□□□ -1.78
UFM1-201ENST00000239878 MOXD1Q6UVY6 613 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 FBXO11Q86XK2 927 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 SLITRK4Q8IW52 837 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 PAF1Q8N7H5 531 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 C3orf58Q8NDZ4 430 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 IL31RAQ8NI17 732 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 MIPOL1Q8TD10 442 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 NACC2Q96BF6 587 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 KCTD12Q96CX2 325 aaKnown RBP3.94□□□□□ -1.78
UFM1-201ENST00000239878 ZSCAN31Q96LW9 406 aaPredicted RBP3.94□□□□□ -1.78
UFM1-201ENST00000239878 TMEM74Q96NL1 305 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 IWS1Q96ST2 819 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 MMP19Q99542 508 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 OXCT2Q9BYC2 517 aaPredicted RBP3.94□□□□□ -1.78
UFM1-201ENST00000239878 PXMP2Q9NR77 195 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 CCPG1Q9ULG6 757 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 HCN4Q9Y3Q4 1203 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 TIMM22Q9Y584 194 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 GOLGA6L19H0YKK7 550 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 GABRDO14764 452 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 DTNBO60941 627 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 STAM2O75886 525 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 KIAA0754O94854 1291 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 DEXIO95424 95 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 GJB6O95452 261 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 RXRAP19793 462 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 TUBP50607 506 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 RPS6P62753 249 aaKnown RBP3.94□□□□□ -1.78
UFM1-201ENST00000239878 CNTN2Q02246 1040 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 CACNB2Q08289 660 aaPredicted RBP3.94□□□□□ -1.78
UFM1-201ENST00000239878 TRIM32Q13049 653 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 AP3B2Q13367 1082 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 CUL4BQ13620 913 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 PGM5Q15124 567 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 CTC1Q2NKJ3 1217 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 GFOD2Q3B7J2 385 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 TUBB8Q3ZCM7 444 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 PERM1Q5SV97 790 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 KIAA0319Q5VV43 1072 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 FAM117BQ6P1L5 589 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 CCDC81Q6ZN84 652 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 NANOGNBQ7Z5D8 188 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 VSIG10LQ86VR7 867 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 MICU3Q86XE3 530 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 CCDC65Q8IXS2 484 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 CPXCR1Q8N123 301 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 ANKRD42Q8N9B4 389 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 CCDC150Q8NCX0 1101 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 RRP36Q96EU6 259 aaKnown RBP3.94□□□□□ -1.78
UFM1-201ENST00000239878 MPP4Q96JB8 637 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 ZWILCHQ9H900 591 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 EBF2Q9HAK2 575 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 VTA1Q9NP79 307 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 HAUS2Q9NVX0 235 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 ANO10Q9NW15 660 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 RHBDL2Q9NX52 303 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 MAPRE3Q9UPY8 281 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 WDR37Q9Y2I8 494 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 MRPL11Q9Y3B7 192 aaKnown RBP3.94□□□□□ -1.78
UFM1-201ENST00000239878 MCM3APO60318 1980 aa3.94□□□□□ -1.78
UFM1-201ENST00000239878 IGKV6D-21A0A0A0MT36 114 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 PTPDC1A2A3K4 754 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 ARHGAP33O14559 1287 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 EIF3HO15372 352 aaKnown RBP eCLIP3.93□□□□□ -1.78
UFM1-201ENST00000239878 JAK2O60674 1132 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 CFHP08603 1231 aa3.93□□□□□ -1.78
UFM1-201ENST00000239878 FCER1AP12319 257 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms