RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 INO80B-WBP1J3KQ70 363 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 DDX39AO00148 427 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 ACKR2O00590 384 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PRRG1O14668 218 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SLC9A3R1O14745 358 aaPredicted RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 KHNYNO15037 678 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 APBB3O95704 486 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 CYP3A5P20815 502 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 INAVAQ3KP66 663 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 ITPRIPL2Q3MIP1 535 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 XKR9Q5GH70 373 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SPECC1Q5M775 1068 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 UBXN11Q5T124 520 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 STPG1Q5TH74 334 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 RNF43Q68DV7 783 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PRR23BQ6ZRT6 265 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 NEK8Q86SG6 692 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 MAP4K3Q8IVH8 894 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 LRRC71Q8N4P6 559 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 MS4A3Q96HJ5 214 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 OSBPL7Q9BZF2 842 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 ZDHHC5Q9C0B5 715 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PLEKHA5Q9HAU0 1116 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 CDHR5Q9HBB8 845 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TUFT1Q9NNX1 390 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 EBF1Q9UH73 591 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TPX2Q9ULW0 747 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 ARL5CA6NH57 179 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 FAM86B1E9PN63 330 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 RIOK3O14730 519 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 RPP40O75818 363 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 CSPG5O95196 566 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 FAM86B2P0C5J1 330 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 MCF2P10911 925 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TCF3P15923 654 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TARSP26639 723 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 KPNA1P52294 538 aaPredicted RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 EVCP57679 992 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SSRP1Q08945 709 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 FUT2Q10981 343 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 USP39Q53GS9 565 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 FAM171A1Q5VUB5 890 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 CREB3L3Q68CJ9 461 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 BLOC1S2Q6QNY1 142 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SLC36A4Q6YBV0 504 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 DDX42Q86XP3 938 aaKnown RBP eCLIP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 BLIDQ8IZY5 108 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 CPA6Q8N4T0 437 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 RNF149Q8NC42 400 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 DEPTORQ8TB45 409 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PHF12Q96QT6 1004 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 GAD1Q99259 594 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TMEM206Q9H813 350 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TMEM9BQ9NQ34 198 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 IGSF5Q9NSI5 407 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 DKK4Q9UBT3 224 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PARP2Q9UGN5 583 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 FAM221BA6H8Z2 402 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SLC27A2O14975 620 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TSPAN1O60635 241 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 ABLIM3O94929 683 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 KCNK5O95279 499 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 DCNP07585 359 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 CCDC192P0DO97 292 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 ATF2P15336 505 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SP100P23497 879 aaPredicted RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 NAMPTP43490 491 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SCNN1GP51170 649 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 FCHO2Q0JRZ9 810 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SLC14A1Q13336 389 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 ANKRD1Q15327 319 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 USP37Q86T82 979 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 MAML2Q8IZL2 1156 aaPredicted RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 LNX1Q8TBB1 728 aaPredicted RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SLC7A14Q8TBB6 771 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PRPF31Q8WWY3 499 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 KCNN1Q92952 543 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SPACA7Q96KW9 195 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 P2RY13Q9BPV8 354 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 FOXQ1Q9C009 403 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 DNAI2Q9GZS0 605 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 PCDHB8Q9UN66 801 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 MSRB2Q9Y3D2 182 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 NUB1Q9Y5A7 615 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SUPT16HQ9Y5B9 1047 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 MYBPHLA2RUH7 354 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 NT5C1B-RDH14C9J2C7 533 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 AXIN1O15169 862 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 NARSO43776 548 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 KIF4AO95239 1232 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 RHOP08100 348 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 KCNE1P15382 129 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TGM1P22735 817 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 GRM5P41594 1212 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 TRAPPC10P48553 1259 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 NOVA1P51513 510 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 EXOSC10Q01780 885 aaKnown RBP2.52□□□□□ -2.01
PRKD3-201ENST00000234179 SPEM2Q0P670 501 aa2.52□□□□□ -2.01
PRKD3-201ENST00000234179 CDCA2Q69YH5 1023 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms