RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 DAB2P98082 770 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 TFAP4Q01664 338 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 ZNF792Q3KQV3 632 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 ZNF569Q5MCW4 686 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 ZNF554Q86TJ5 538 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 SHC3Q92529 594 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 DPF3Q92784 378 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 FERMT2Q96AC1 680 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 SHISA4Q96DD7 197 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 HOOK2Q96ED9 719 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 PHF20Q9BVI0 1012 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 VPS16Q9H269 839 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 GHITMQ9H3K2 345 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 KCNQ5Q9NR82 932 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 AFF4Q9UHB7 1163 aaKnown RBP8.88□□□□□ -0.99
SPARC-201ENST00000231061 TMCO1Q9UM00 188 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 JAG2Q9Y219 1238 aa8.88□□□□□ -0.99
SPARC-201ENST00000231061 ENPP3O14638 875 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 CETN3O15182 167 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 CCDC166P0CW27 439 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 HSPA6P17066 643 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 RFC4P35249 363 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 AP3M2P53677 418 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 PRKCEQ02156 737 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 NFE2L1Q14494 772 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 NFE2Q16621 373 aaPredicted RBP8.87□□□□□ -0.99
SPARC-201ENST00000231061 SETMARQ53H47 684 aaPredicted RBP8.87□□□□□ -0.99
SPARC-201ENST00000231061 RAD9BQ6WBX8 426 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 TMTC1Q8IUR5 882 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 LRRC34Q8IZ02 419 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 SLC38A6Q8IZM9 456 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 NATD1Q8N6N6 113 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 EHBP1Q8NDI1 1231 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 RFWD2Q8NHY2 731 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 TTC8Q8TAM2 541 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 NUP88Q99567 741 aaPredicted RBP8.87□□□□□ -0.99
SPARC-201ENST00000231061 TAB2Q9NYJ8 693 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 TSR3Q9UJK0 312 aaKnown RBP8.87□□□□□ -0.99
SPARC-201ENST00000231061 SLC8A2Q9UPR5 921 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 L3MBTL1Q9Y468 752 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 TLL2Q9Y6L7 1015 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 NID2Q14112 1375 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 LRP6O75581 1613 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 SHANK3Q9BYB0 1731 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 A0A0U1RQJ8 604 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 RGS20O76081 388 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 PRPF6O94906 941 aaKnown RBP8.87□□□□□ -0.99
SPARC-201ENST00000231061 MT-ND3P03897 115 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 PDHA1P08559 390 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 GBP1P32455 592 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 PCP4P48539 62 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 MRPS15P82914 257 aaKnown RBP8.87□□□□□ -0.99
SPARC-201ENST00000231061 PTK2Q05397 1052 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 CCDC62Q6P9F0 684 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 ZDHHC17Q8IUH5 632 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 RNF139Q8WU17 664 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 PCMTD1Q96MG8 357 aaPredicted RBP8.87□□□□□ -0.99
SPARC-201ENST00000231061 TTC1Q99614 292 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 RIOK1Q9BRS2 568 aaKnown RBP8.87□□□□□ -0.99
SPARC-201ENST00000231061 PPP1R12CQ9BZL4 782 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 PARVBQ9HBI1 364 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 ARFGAP3Q9NP61 516 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 BLOC1S4Q9NUP1 217 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 FBXL21Q9UKT6 434 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 PCDHGB5Q9Y5G0 923 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 YKT6O15498 198 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 MAP3K13O43283 966 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 CAMTA2O94983 1202 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 CALM1P0DP23 149 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 CALM2P0DP24 149 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 CALM3P0DP25 149 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 CPT1AP50416 773 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 RPP30P78346 268 aaKnown RBP8.87□□□□□ -0.99
SPARC-201ENST00000231061 CYTH1Q15438 398 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 INTS5Q6P9B9 1019 aaKnown RBP8.87□□□□□ -0.99
SPARC-201ENST00000231061 C7orf61Q8IZ16 206 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 GPR161Q8N6U8 529 aaKnown RBP8.87□□□□□ -0.99
SPARC-201ENST00000231061 ARRDC4Q8NCT1 418 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 TNFRSF25Q93038 417 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 PANX2Q96RD6 677 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 PSTPIP2Q9H939 334 aa8.87□□□□□ -0.99
SPARC-201ENST00000231061 DDX60Q8IY21 1712 aaKnown RBP8.86□□□□□ -0.99
SPARC-201ENST00000231061 ECM29Q5VYK3 1845 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 ANO9A1A5B4 782 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 CACNB4O00305 520 aaPredicted RBP8.86□□□□□ -0.99
SPARC-201ENST00000231061 CYTH3O43739 400 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 BUB1BO60566 1050 aaPredicted RBP8.86□□□□□ -0.99
SPARC-201ENST00000231061 NTSR2O95665 410 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 APOA4P06727 396 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 SFTPCP11686 197 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 CBX5P45973 191 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 SULT1E1P49888 294 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 MDH1BQ5I0G3 518 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 CLEC2AQ6UVW9 174 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 TMTC3Q6ZXV5 915 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 KIFC2Q96AC6 838 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.86□□□□□ -0.99
SPARC-201ENST00000231061 WDR35Q9P2L0 1181 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 ADGRG1Q9Y653 693 aa8.86□□□□□ -0.99
SPARC-201ENST00000231061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms