RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 ANKRD42Q8N9B4 389 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 CCHCR1Q8TD31 782 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 CKAP2Q8WWK9 683 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 SEMA4DQ92854 862 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 STAMBPL1Q96FJ0 436 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 SNF8Q96H20 258 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 EBF2Q9HAK2 575 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 ALADP13716 330 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 CYP11B1P15538 503 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 CDR2Q01850 454 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 MAP2K1Q02750 393 aaPredicted RBP18.66■□□□□ 0.58
PRPF19-201ENST00000227524 PTK6Q13882 451 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 NUGGCQ68CJ6 796 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 PLVAPQ9BX97 442 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 MLXIPLQ9NP71 852 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 CHST7Q9NS84 486 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 SUFUQ9UMX1 484 aa18.66■□□□□ 0.58
PRPF19-201ENST00000227524 FOXO6A8MYZ6 492 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 KIF1CO43896 1103 aaKnown RBP18.65■□□□□ 0.58
PRPF19-201ENST00000227524 GJB6O95452 261 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 TTC4O95801 387 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 PLS3P13797 630 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 IVDP26440 423 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 ALDH5A1P51649 535 aaPredicted RBP18.65■□□□□ 0.58
PRPF19-201ENST00000227524 BNIP1Q12981 228 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 MIER3Q7Z3K6 550 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 SPATA21Q7Z572 469 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 GBP7Q8N8V2 638 aaPredicted RBP18.65■□□□□ 0.58
PRPF19-201ENST00000227524 RIT2Q99578 217 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 RANBP17Q9H2T7 1088 aaKnown RBP18.65■□□□□ 0.58
PRPF19-201ENST00000227524 KCNK9Q9NPC2 374 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 HACL1Q9UJ83 578 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 ARL2BPQ9Y2Y0 163 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 DICER1Q9UPY3 1922 aaKnown RBP18.65■□□□□ 0.58
PRPF19-201ENST00000227524 TULP1O00294 542 aaPredicted RBP18.65■□□□□ 0.58
PRPF19-201ENST00000227524 O00370 1275 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 IGF2BP3O00425 579 aaKnown RBP eCLIP18.65■□□□□ 0.58
PRPF19-201ENST00000227524 ITGA8P53708 1063 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 COPS2P61201 443 aa18.65■□□□□ 0.58
PRPF19-201ENST00000227524 SYDE1Q6ZW31 735 aaPredicted RBP18.65■□□□□ 0.58
PRPF19-201ENST00000227524 DNAJC17Q9NVM6 304 aaKnown RBP18.65■□□□□ 0.58
PRPF19-201ENST00000227524 MRPL11Q9Y3B7 192 aaKnown RBP18.65■□□□□ 0.58
PRPF19-201ENST00000227524 GOLGA8IPA6NC78 632 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 GOLGA8JA6NMD2 632 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 ASNSP08243 561 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 GBP2P32456 591 aaPredicted RBP18.64■□□□□ 0.57
PRPF19-201ENST00000227524 CLNS1AP54105 237 aaKnown RBP18.64■□□□□ 0.57
PRPF19-201ENST00000227524 GTF2BQ00403 316 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 TNFAIP1Q13829 316 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 MPP2Q14168 576 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 ZYXQ15942 572 aaKnown RBP18.64■□□□□ 0.57
PRPF19-201ENST00000227524 ACAD10Q6JQN1 1059 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 HAUS6Q7Z4H7 955 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 GDAP1Q8TB36 358 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 HELQQ8TDG4 1101 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 AGAP11Q8TF27 550 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 ATG4AQ8WYN0 398 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 MIEF2Q96C03 454 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 MXRA8Q9BRK3 442 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 TCEA3O75764 348 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 GH1P01241 217 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 RPSAP08865 295 aaKnown RBP18.64■□□□□ 0.57
PRPF19-201ENST00000227524 BRAFP15056 766 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 MAN1A1P33908 653 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 KYNUQ16719 465 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 DDX1Q92499 740 aaKnown RBP18.64■□□□□ 0.57
PRPF19-201ENST00000227524 L3MBTL3Q96JM7 780 aaPredicted RBP18.64■□□□□ 0.57
PRPF19-201ENST00000227524 PLCD4Q9BRC7 762 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 NINJ2Q9NZG7 142 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 PKD2L1Q9P0L9 805 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 PRKAG3Q9UGI9 489 aa18.64■□□□□ 0.57
PRPF19-201ENST00000227524 SBF1O95248 1867 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 THAP12O43422 761 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 P4HBP07237 508 aaKnown RBP18.63■□□□□ 0.57
PRPF19-201ENST00000227524 SCP2P22307 547 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 RARRES1P49788 294 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 CAV1Q03135 178 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 MYO1EQ12965 1108 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 TRIP13Q15645 432 aaPredicted RBP18.63■□□□□ 0.57
PRPF19-201ENST00000227524 ZKSCAN8Q15776 578 aaPredicted RBP18.63■□□□□ 0.57
PRPF19-201ENST00000227524 GRK7Q8WTQ7 553 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 MAIP1Q8WWC4 291 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 HERPUD2Q9BSE4 406 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 DCLK3Q9C098 648 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 DEFB129Q9H1M3 183 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 LGALS13Q9UHV8 139 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 ANAPC7Q9UJX3 599 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 L3MBTL1Q9Y468 752 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 ZHX2Q9Y6X8 837 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 ADGRA3Q8IWK6 1321 aa18.63■□□□□ 0.57
PRPF19-201ENST00000227524 SORBS3O60504 671 aa18.62■□□□□ 0.57
PRPF19-201ENST00000227524 ATF2P15336 505 aa18.62■□□□□ 0.57
PRPF19-201ENST00000227524 ITGB5P18084 799 aa18.62■□□□□ 0.57
PRPF19-201ENST00000227524 MAPK4P31152 587 aa18.62■□□□□ 0.57
PRPF19-201ENST00000227524 MCCD1P59942 119 aaPredicted RBP18.62■□□□□ 0.57
PRPF19-201ENST00000227524 SNRPFP62306 86 aaKnown RBP18.62■□□□□ 0.57
PRPF19-201ENST00000227524 CLEC16AQ2KHT3 1053 aa18.62■□□□□ 0.57
PRPF19-201ENST00000227524 CBWD2Q8IUF1 395 aa18.62■□□□□ 0.57
PRPF19-201ENST00000227524 CYP4X1Q8N118 509 aa18.62■□□□□ 0.57
PRPF19-201ENST00000227524 KLHL29Q96CT2 875 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms