RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 MRPL4Q9BYD3 311 aaKnown RBP12.58□□□□□ -0.39
TNFAIP1-201ENST00000226225 CAPN11Q9UMQ6 739 aa12.58□□□□□ -0.39
TNFAIP1-201ENST00000226225 TMCO5BA8MYB1 307 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 ADCY6O43306 1168 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 MAGEA1P43355 309 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 PHKA2P46019 1235 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 TM4SF4P48230 202 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 FMO5P49326 533 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 VEGFBP49765 207 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 NCKAP1LP55160 1127 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 MORN1Q5T089 497 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 CATSPER4Q7RTX7 472 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 MAP4K3Q8IVH8 894 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 UBE2TQ9NPD8 197 aaPredicted RBP12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 PCDHA13Q9Y5I0 950 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 TARSL2A2RTX5 802 aaKnown RBP12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 SMIM23A6NLE4 172 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 MAGEB2O15479 319 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 ADCY3O60266 1144 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 ZNF200P98182 395 aaPredicted RBP12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 NAA35Q5VZE5 725 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 ERGIC2Q96RQ1 377 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 CEP89Q96ST8 783 aa12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 RBAKQ9NYW8 714 aaPredicted RBP12.58□□□□□ -0.4
TNFAIP1-201ENST00000226225 HGSO14964 777 aaPredicted RBP12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 MEFVO15553 781 aaPredicted RBP12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 B4GALT5O43286 388 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 KRT5P13647 590 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 EFNA5P52803 228 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 ZNF484Q5JVG2 852 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 DDX42Q86XP3 938 aaKnown RBP eCLIP12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 CPB2Q96IY4 423 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 RNF186Q9NXI6 227 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 SALL4Q9UJQ4 1053 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 SLC16A3O15427 465 aaKnown RBP12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 SHOX2O60902 331 aaPredicted RBP12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 SKAP2O75563 359 aaPredicted RBP12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 GFPT2O94808 682 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 CPP00450 1065 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 NR1D1P20393 614 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 KIF11P52732 1056 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 EPHB4P54760 987 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 ASIC2Q16515 512 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 SLC9C1Q4G0N8 1177 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 CBWD6Q4V339 395 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 CBWD3Q5JTY5 395 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 CBWD5Q5RIA9 395 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 SLFN12LQ6IEE8 588 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 B4GALNT4Q76KP1 1039 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 ZNF473Q8WTR7 871 aaKnown RBP12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 DNAJB3Q8WWF6 145 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 TRIB2Q92519 343 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 ALS2CR12Q96Q35 445 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 IGKV6D-21A0A0A0MT36 114 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 EIF4E1BA6NMX2 242 aaKnown RBP12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 CTGFP29279 349 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 ADSSP30520 456 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 MFSD10Q14728 455 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 RNF169Q8NCN4 708 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 DNAJC7Q99615 494 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 OSMRQ99650 979 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 PI4K2AQ9BTU6 479 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 TRIM31Q9BZY9 425 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 XPNPEP3Q9NQH7 507 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 TRIM17Q9Y577 477 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 UBE4BO95155 1302 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 ZMYM2Q9UBW7 1377 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 MYH10P35580 1976 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 OTOFQ9HC10 1997 aa12.57□□□□□ -0.4
TNFAIP1-201ENST00000226225 ARL2P36404 184 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 CCT8L2Q96SF2 557 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 ADPGKQ9BRR6 497 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 IMPG2Q9BZV3 1241 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 MCM3APO60318 1980 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 GOLGA6L10A6NI86 522 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 ADRB2P07550 413 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 UCHL3P15374 230 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 KCNMA1Q12791 1236 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 WDR44Q5JSH3 913 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 CCDC121Q6ZUS5 278 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 TRIM58Q8NG06 486 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 RPGRIP1Q96KN7 1286 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 C2orf40Q9H1Z8 148 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 RNF19AQ9NV58 838 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 ADAMTS1Q9UHI8 967 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 DNAJC12Q9UKB3 198 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 GJD2Q9UKL4 321 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 DOCK3Q8IZD9 2030 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 LGR5O75473 907 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 SMIM10L2AP0DMW4 78 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 SMIM10L2BP0DMW5 78 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 PON1P27169 355 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 TRPC3Q13507 836 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 ATF7IP2Q5U623 682 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 MSL3Q8N5Y2 521 aaKnown RBP12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 LMBR1Q8WVP7 490 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 C16orf70Q9BSU1 422 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 MKNK1Q9BUB5 465 aa12.56□□□□□ -0.4
TNFAIP1-201ENST00000226225 HAUS2Q9NVX0 235 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms