RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 TOX2Q96NM4 488 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 NXF3Q9H4D5 531 aaKnown RBP17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 PLAGL2Q9UPG8 496 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 HES2Q9Y543 173 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 LRRC53A6NM62 1247 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 CITO14578 2027 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 ZC3H11AO75152 810 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 VNN1O95497 513 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 SELPP16109 830 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 RFX1P22670 979 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 HNRNPH3P31942 346 aaKnown RBP17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 TFAMQ00059 246 aaKnown RBP17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 JADE1Q6IE81 842 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 GJB7Q6PEY0 223 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 LRRC8DQ7L1W4 858 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 TRAPPC11Q7Z392 1133 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 SMG8Q8ND04 991 aaKnown RBP17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 ANKRD36BP1Q96IX9 119 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 MTMR12Q9C0I1 747 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 PRDM10Q9NQV6 1147 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 ZNHIT6Q9NWK9 470 aaKnown RBP17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 MYO6Q9UM54 1294 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 IPPQ9Y573 584 aa17.22■□□□□ 0.35
SNRPD3-201ENST00000215829 PITPNM1O00562 1244 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 PHACTR2O75167 634 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 HLA-DRAP01903 254 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 TNNC2P02585 160 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 NFICP08651 508 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 TMEM191BP0C7N4 346 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 MBTPS1Q14703 1052 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 MEA1Q16626 185 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 WDR59Q6PJI9 974 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 ALKAL1Q6UXT8 129 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 ZSCAN30Q86W11 494 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 NT5DC4Q86YG4 428 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 SYN2Q92777 582 aaPredicted RBP17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 SNX27Q96L92 541 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 TMEM106CQ9BVX2 250 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 TRAIPQ9BWF2 469 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 STK33Q9BYT3 514 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 DNAJC12Q9UKB3 198 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 AJAP1Q9UKB5 411 aaPredicted RBP17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 C2CD2Q9Y426 696 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 PCDHB2Q9Y5E7 798 aa17.21■□□□□ 0.35
SNRPD3-201ENST00000215829 DCDC2CA8MYV0 355 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 RECQL4O94761 1208 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 AKAP5P24588 427 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 PIK3CAP42336 1068 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 JAM2P57087 298 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 NCOA4Q13772 614 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 DSC3Q14574 896 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 TMTC1Q8IUR5 882 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 SPAG5Q96R06 1193 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 UBE2TQ9NPD8 197 aaPredicted RBP17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 FAM105AQ9NUU6 356 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 PYCARDQ9ULZ3 195 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 DERAQ9Y315 318 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 ARHGAP6O43182 974 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 CST3P01034 146 aaPredicted RBP17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 CDK17Q00537 523 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 TLE2Q04725 743 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 FAAP100Q0VG06 881 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 RAPGEF1Q13905 1077 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 TMEM132DQ14C87 1099 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 TRIM60Q495X7 471 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 WDR44Q5JSH3 913 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 SFMBT2Q5VUG0 894 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 CYP26C1Q6V0L0 522 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 ARHGEF19Q8IW93 802 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 NT5C1BQ96P26 610 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 APOL6Q9BWW8 343 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 C11orf49Q9H6J7 331 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 AIPL1Q9NZN9 384 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 CNTN3Q9P232 1028 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 PARP2Q9UGN5 583 aa17.2■□□□□ 0.34
SNRPD3-201ENST00000215829 MGEA5O60502 916 aa17.19■□□□□ 0.34
SNRPD3-201ENST00000215829 XKR4Q5GH76 650 aa17.19■□□□□ 0.34
SNRPD3-201ENST00000215829 E4F1Q66K89 784 aaPredicted RBP17.19■□□□□ 0.34
SNRPD3-201ENST00000215829 HACE1Q8IYU2 909 aa17.19■□□□□ 0.34
SNRPD3-201ENST00000215829 HELQQ8TDG4 1101 aa17.19■□□□□ 0.34
SNRPD3-201ENST00000215829 KIF12Q96FN5 646 aa17.19■□□□□ 0.34
SNRPD3-201ENST00000215829 PAWRQ96IZ0 340 aaKnown RBP17.19■□□□□ 0.34
SNRPD3-201ENST00000215829 TSPAN18Q96SJ8 248 aa17.19■□□□□ 0.34
SNRPD3-201ENST00000215829 CHP1Q99653 195 aa17.19■□□□□ 0.34
SNRPD3-201ENST00000215829 PI4K2AQ9BTU6 479 aa17.19■□□□□ 0.34
SNRPD3-201ENST00000215829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.19■□□□□ 0.346e-6■■■■■ 48.1
SNRPD3-201ENST00000215829 RALGAPA2Q2PPJ7 1873 aa17.19■□□□□ 0.34
SNRPD3-201ENST00000215829 TRIP11Q15643 1979 aa17.19■□□□□ 0.34
SNRPD3-201ENST00000215829 ZNF623O75123 536 aa17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 RAB27AP51159 221 aa17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 TRPC3Q13507 836 aa17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 DRAP1Q14919 205 aaPredicted RBP17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 SCARA3Q6AZY7 606 aa17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 MRPL10Q7Z7H8 261 aaKnown RBP17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 PPM1KQ8N3J5 372 aa17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 C1orf127Q8N9H9 656 aa17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 TATDN2Q93075 761 aa17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 FAM81BQ96LP2 452 aa17.18■□□□□ 0.34
SNRPD3-201ENST00000215829 ZMAT2Q96NC0 199 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms