RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 ACSL3O95573 720 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 ADRB2P07550 413 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 ZNF568Q3ZCX4 644 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 CASZ1Q86V15 1759 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 FBXL13Q8NEE6 735 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 SH3BP1Q9Y3L3 701 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 MRPL42Q9Y6G3 142 aaKnown RBP13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 MYH8P13535 1937 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 SHANK3Q9BYB0 1731 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 HMGB1P1B2RPK0 211 aaPredicted RBP13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 PPATQ06203 517 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 KDM7AQ6ZMT4 941 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 ANO5Q75V66 913 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 BZW1Q7L1Q6 419 aaKnown RBP13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 LONP2Q86WA8 852 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 ATG4AQ8WYN0 398 aa13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 MPHOSPH6Q99547 160 aaKnown RBP13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.77□□□□□ -0.21
PCDHB4-201ENST00000194152 DKC1O60832 514 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 NFX1Q12986 1120 aaKnown RBP13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 SPON1Q9HCB6 807 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 RGS17Q9UGC6 210 aaPredicted RBP13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 hCG_2014768A0A024R1R8 64 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 HOXD13P35453 343 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 CTCFP49711 727 aaPredicted RBP13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 CCDC6Q16204 474 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 AMHR2Q16671 573 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 GLRA4Q5JXX5 417 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 SV2AQ7L0J3 742 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 C3orf20Q8ND61 904 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 BSNDQ8WZ55 320 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 TMEM117Q9H0C3 514 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 PRRC2BQ5JSZ5 2229 aaKnown RBP13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 F8VZ95 297 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 MARCKSL1P49006 195 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 NAB2Q15742 525 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 FAM47EQ6ZV65 393 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 LMNTD2Q8IXW0 634 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 ZNF564Q8TBZ8 553 aaPredicted RBP13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 PRPF31Q8WWY3 499 aaKnown RBP13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 STK33Q9BYT3 514 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 CYP26B1Q9NR63 512 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 RAB20Q9NX57 234 aa13.76□□□□□ -0.21
PCDHB4-201ENST00000194152 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 CNTNAP1P78357 1384 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 YARSP54577 528 aaKnown RBP13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 SKOR1P84550 965 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 USP4Q13107 963 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 DRP2Q13474 957 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 MEA1Q16626 185 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 ZBTB41Q5SVQ8 909 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 CCDC77Q9BR77 488 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 ADAM22Q9P0K1 906 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 ZNF148Q9UQR1 794 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 ALG6Q9Y672 507 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 SSU72P8A0A1W2PR75 194 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 NLRP11P59045 1033 aaKnown RBP13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 PPP2R5DQ14738 602 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 WDR72Q3MJ13 1102 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 RNF10Q8N5U6 811 aaKnown RBP13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 SLC16A10Q8TF71 515 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 CLEC4DQ8WXI8 215 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 FMO2Q99518 471 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 ABCA3Q99758 1704 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 ZNF862O60290 1169 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 VTNP04004 478 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 COMTP21964 271 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 CIITAP33076 1130 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 ELF3P78545 371 aaPredicted RBP13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 DR1Q01658 176 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 LAMB3Q13751 1172 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 CREG2Q8IUH2 290 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 TMEM130Q8N3G9 435 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 MCPH1Q8NEM0 835 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 FBF1Q8TES7 1133 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 AGAP11Q8TF27 550 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 MMP19Q99542 508 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 TRIM7Q9C029 511 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 BATF3Q9NR55 127 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 PAPOLBQ9NRJ5 636 aaKnown RBP13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 SEL1LQ9UBV2 794 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 C15orf41Q9Y2V0 281 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 IKBKGQ9Y6K9 419 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 USH1CQ9Y6N9 552 aa13.75□□□□□ -0.21
PCDHB4-201ENST00000194152 CYP3A7-CYP3A51PA0A087WV96 503 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 HLA-DRAP01903 254 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 KCNA3P22001 575 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 CYP3A7P24462 503 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 MAPK6Q16659 721 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 LRRC23Q53EV4 343 aaPredicted RBP13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 SGO2Q562F6 1265 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 CYP4A22Q5TCH4 519 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 PAPD7Q5XG87 772 aaKnown RBP13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 GPD1LQ8N335 351 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 RAPGEF5Q92565 580 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 PDGFCQ9NRA1 345 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 TRAF3IP3Q9Y228 551 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 C4AP0C0L4 1744 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 A0A1W2PQJ5 194 aa13.74□□□□□ -0.21
PCDHB4-201ENST00000194152 PYGLP06737 847 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms