RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 H3BRB1 525 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 TXNDC9O14530 226 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 MAP3K7O43318 606 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 SNX2O60749 519 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 TUT1Q9H6E5 874 aaKnown RBP11.73□□□□□ -0.53
RGPD5-201ENST00000016946 STK38LQ9Y2H1 464 aa11.73□□□□□ -0.53
RGPD5-201ENST00000016946 PIK3R2O00459 728 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 TGFB3P10600 412 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 AKR1A1P14550 325 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 DDX53Q86TM3 631 aaKnown RBP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 SOCS4Q8WXH5 440 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 SDCCAG3Q96C92 435 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 SLC4A9Q96Q91 983 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 KIFC3Q9BVG8 833 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 TTC4O95801 387 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 SPATS2Q86XZ4 545 aaKnown RBP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 N4BP2L2Q92802 583 aaPredicted RBP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 RIOX1Q9H6W3 641 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 EVI5O60447 810 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 B3GAT3O94766 335 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 MX2P20592 715 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 ADCY2Q08462 1091 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 TAS2R42Q7RTR8 314 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 LRGUKQ96M69 825 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 ASCC2Q9H1I8 757 aaPredicted RBP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 LRG1P02750 347 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 NSUN2Q08J23 767 aaKnown RBP eCLIP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 RCN2Q14257 317 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 KIZQ2M2Z5 673 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 PARD6BQ9BYG5 372 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 CNOT10Q9H9A5 744 aaKnown RBP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 E5RI56 91 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 COPEO14579 308 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 ODC1P11926 461 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 NAMPTP43490 491 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 YWHAHQ04917 246 aaPredicted RBP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 KLHL38Q2WGJ6 581 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 C6orf118Q5T5N4 469 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 ASAP3Q8TDY4 903 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 RUSC1Q9BVN2 902 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 PPP1R12CQ9BZL4 782 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 DDX4Q9NQI0 724 aaKnown RBP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 KLK14Q9P0G3 267 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 NOVA2Q9UNW9 492 aaKnown RBP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 DISP2A7MBM2 1401 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 WEE2P0C1S8 567 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 CYP2C8P10632 490 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 INHBEP58166 350 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 ARHGAP15Q53QZ3 475 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 ZC3H18Q86VM9 953 aaKnown RBP11.72□□□□□ -0.53
RGPD5-201ENST00000016946 PGBD3Q8N328 593 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 ABHD16BQ9H3Z7 469 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 KCNQ5Q9NR82 932 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 GPRC5DQ9NZD1 345 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 NAGPAQ9UK23 515 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 TRIM17Q9Y577 477 aa11.72□□□□□ -0.53
RGPD5-201ENST00000016946 GOLGA8MH3BSY2 632 aa11.71□□□□□ -0.53
RGPD5-201ENST00000016946 SEC31AO94979 1220 aaKnown RBP11.71□□□□□ -0.53
RGPD5-201ENST00000016946 KRT14P02533 472 aa11.71□□□□□ -0.53
RGPD5-201ENST00000016946 DHX40Q8IX18 779 aaKnown RBP11.71□□□□□ -0.53
RGPD5-201ENST00000016946 CPA5Q8WXQ8 436 aa11.71□□□□□ -0.53
RGPD5-201ENST00000016946 SARS2Q9NP81 518 aaKnown RBP11.71□□□□□ -0.53
RGPD5-201ENST00000016946 BAIAP2L1Q9UHR4 511 aa11.71□□□□□ -0.53
RGPD5-201ENST00000016946 UBE2Q2Q8WVN8 375 aa11.71□□□□□ -0.53
RGPD5-201ENST00000016946 SENP7Q9BQF6 1050 aa11.71□□□□□ -0.53
RGPD5-201ENST00000016946 DDX47Q9H0S4 455 aaKnown RBP11.71□□□□□ -0.53
RGPD5-201ENST00000016946 F5H423 210 aaPredicted RBP11.71□□□□□ -0.53
RGPD5-201ENST00000016946 NCK2O43639 380 aa11.71□□□□□ -0.53
RGPD5-201ENST00000016946 ITGB3P05106 788 aa11.71□□□□□ -0.53
RGPD5-201ENST00000016946 VIL1P09327 827 aaKnown RBP11.71□□□□□ -0.53
RGPD5-201ENST00000016946 DEUP1Q05D60 604 aa11.71□□□□□ -0.53
RGPD5-201ENST00000016946 GLRA4Q5JXX5 417 aa11.71□□□□□ -0.53
RGPD5-201ENST00000016946 ATG16L1Q676U5 607 aa11.71□□□□□ -0.53
RGPD5-201ENST00000016946 TTC8Q8TAM2 541 aa11.71□□□□□ -0.53
RGPD5-201ENST00000016946 NNTQ13423 1086 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 CCDC197Q8NCU1 140 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 VPS11Q9H270 941 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 C2CD2LO14523 706 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 FMR1Q06787 632 aaKnown RBP eCLIP11.71□□□□□ -0.54
RGPD5-201ENST00000016946 GPS1Q13098 491 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 SLC30A5Q8TAD4 765 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 HAUS8Q9BT25 410 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 A0A1B0GTH6 734 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 SSU72P8A0A1W2PR75 194 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 MED24O75448 989 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 HSPA4LO95757 839 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 MRPS25P82663 173 aaKnown RBP11.71□□□□□ -0.54
RGPD5-201ENST00000016946 SLC18A3Q16572 532 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 TTC19Q6DKK2 380 aaPredicted RBP11.71□□□□□ -0.54
RGPD5-201ENST00000016946 MPZL3Q6UWV2 235 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 SH3KBP1Q96B97 665 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 FGD4Q96M96 766 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 VCX3AQ9NNX9 186 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 VTA1Q9NP79 307 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 GPRC5CQ9NQ84 441 aa11.71□□□□□ -0.54
RGPD5-201ENST00000016946 AGPAT3Q9NRZ7 376 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms