RNA–Protein interactions for RNA: ENST00000013070.10

UBR7-201, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR7, Length 3,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-201ENST00000013070 NAIF1Q69YI7 327 aaPredicted RBP13.74□□□□□ -0.21
UBR7-201ENST00000013070 KRT39Q6A163 491 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 HHIPL2Q6UWX4 724 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 LDHDQ86WU2 507 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 RPS6KC1Q96S38 1066 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 HERPUD2Q9BSE4 406 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 AFF2P51816 1311 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 PLIN4Q96Q06 1357 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 DDX60LQ5H9U9 1706 aaKnown RBP13.74□□□□□ -0.21
UBR7-201ENST00000013070 BANF1O75531 89 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 STRN3Q13033 797 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 CCDC6Q16204 474 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 IL31RAQ8NI17 732 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 LMO3Q8TAP4 145 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 PRMT6Q96LA8 375 aaPredicted RBP13.74□□□□□ -0.21
UBR7-201ENST00000013070 PPP1R12CQ9BZL4 782 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 C12orf65Q9H3J6 166 aaKnown RBP13.74□□□□□ -0.21
UBR7-201ENST00000013070 CBX6O95503 412 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 ATP2A2P16615 1042 aaKnown RBP13.74□□□□□ -0.21
UBR7-201ENST00000013070 YWHABP31946 246 aaKnown RBP13.74□□□□□ -0.21
UBR7-201ENST00000013070 CIITAP33076 1130 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 NOP14P78316 857 aaKnown RBP13.74□□□□□ -0.21
UBR7-201ENST00000013070 ZBTB16Q05516 673 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 CRY2Q49AN0 593 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 OLIG1Q8TAK6 271 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 LRRC8CQ8TDW0 803 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 GLIS2Q9BZE0 524 aaPredicted RBP13.74□□□□□ -0.21
UBR7-201ENST00000013070 C1orf112Q9NSG2 853 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 GTF3C4Q9UKN8 822 aa13.74□□□□□ -0.21
UBR7-201ENST00000013070 MRPL11Q9Y3B7 192 aaKnown RBP13.74□□□□□ -0.21
UBR7-201ENST00000013070 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
UBR7-201ENST00000013070 ITIH2P19823 946 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 CNGA1P29973 690 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 AOC3Q16853 763 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 BTNL9Q6UXG8 535 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 CYFIP1Q7L576 1253 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 ZBED8Q8IZ13 594 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 FBXL13Q8NEE6 735 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 CRYGNQ8WXF5 182 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 SERPINB12Q96P63 405 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 LRRC37BQ96QE4 947 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 AAASQ9NRG9 546 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 DMAC2Q9NW81 257 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.73□□□□□ -0.21
UBR7-201ENST00000013070 RAB20Q9NX57 234 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 NAV1Q8NEY1 1877 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 NFIBO00712 420 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 PLS3P13797 630 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 ITGB5P18084 799 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 SEZ6Q53EL9 994 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 CRAMP1Q96RY5 1269 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 KMT5AQ9NQR1 393 aa13.73□□□□□ -0.21
UBR7-201ENST00000013070 COL22A1Q8NFW1 1626 aaPredicted RBP13.73□□□□□ -0.21
UBR7-201ENST00000013070 CDH16O75309 829 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 GSTA1P08263 222 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 ACOT2P49753 483 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 RAD23BP54727 409 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 CDR2Q01850 454 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 GPS1Q13098 491 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 DGKZQ13574 1117 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 TMEM270Q6UE05 265 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 ANKRD35Q8N283 1001 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 SYT11Q9BT88 431 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 TRAIPQ9BWF2 469 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 A0A0G2JND7 137 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 P4HBP07237 508 aaKnown RBP13.72□□□□□ -0.21
UBR7-201ENST00000013070 RARRES1P49788 294 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 WDR44Q5JSH3 913 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 SV2AQ7L0J3 742 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 ATL2Q8NHH9 583 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 GRK7Q8WTQ7 553 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 MKL1Q969V6 931 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 SMC6Q96SB8 1091 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 ROPN1BQ9BZX4 212 aaPredicted RBP13.72□□□□□ -0.21
UBR7-201ENST00000013070 ROPN1Q9HAT0 212 aaPredicted RBP13.72□□□□□ -0.21
UBR7-201ENST00000013070 NPHS2Q9NP85 383 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 ANKFY1Q9P2R3 1169 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 SGK1O00141 431 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 ECE2O60344 883 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 GGPS1O95749 300 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 ALDH3A1P30838 453 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 CETN2P41208 172 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 MAGEA4P43358 317 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 QARSP47897 775 aaKnown RBP13.72□□□□□ -0.21
UBR7-201ENST00000013070 DMP1Q13316 513 aaPredicted RBP13.72□□□□□ -0.21
UBR7-201ENST00000013070 MTMR1Q13613 665 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 FASTKD3Q14CZ7 662 aaKnown RBP13.72□□□□□ -0.21
UBR7-201ENST00000013070 ECHDC2Q86YB7 292 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 CDAN1Q8IWY9 1227 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 GBP7Q8N8V2 638 aaPredicted RBP13.72□□□□□ -0.21
UBR7-201ENST00000013070 CHURC1Q8WUH1 139 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 MYLK2Q9H1R3 596 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 ADAM22Q9P0K1 906 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 NOCTQ9UK39 431 aaKnown RBP13.72□□□□□ -0.21
UBR7-201ENST00000013070 SMCHD1A6NHR9 2005 aa13.72□□□□□ -0.21
UBR7-201ENST00000013070 FOXN2P32314 431 aa13.71□□□□□ -0.21
UBR7-201ENST00000013070 PPP2R5CQ13362 524 aa13.71□□□□□ -0.21
UBR7-201ENST00000013070 DCUN1D2Q6PH85 259 aa13.71□□□□□ -0.21
UBR7-201ENST00000013070 DPH6Q7L8W6 267 aa13.71□□□□□ -0.21
UBR7-201ENST00000013070 FAM71AQ8IYT1 594 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms