RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 ECI2O75521 394 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 SLITRK3O94933 977 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 TARSP26639 723 aaKnown RBP12.34□□□□□ -0.43
NME1-201ENST00000013034 GJB2P29033 226 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 RARRES1P49788 294 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 RAB33AQ14088 237 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 CDCA2Q69YH5 1023 aaPredicted RBP12.34□□□□□ -0.43
NME1-201ENST00000013034 CDR2LQ86X02 465 aaPredicted RBP12.34□□□□□ -0.43
NME1-201ENST00000013034 CCDC83Q8IWF9 413 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 ITFG1Q8TB96 612 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 CLDN23Q96B33 292 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 CNTNAP3BQ96NU0 1288 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 NELL2Q99435 816 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 KXD1Q9BQD3 176 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 FAM126AQ9BYI3 521 aaPredicted RBP12.34□□□□□ -0.43
NME1-201ENST00000013034 CNTNAP3Q9BZ76 1288 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 CACNG4Q9UBN1 327 aa12.34□□□□□ -0.43
NME1-201ENST00000013034 CDV3Q9UKY7 258 aaKnown RBP12.34□□□□□ -0.43
NME1-201ENST00000013034 MRPS17Q9Y2R5 130 aaKnown RBP12.34□□□□□ -0.43
NME1-201ENST00000013034 MTF2Q9Y483 593 aaPredicted RBP12.34□□□□□ -0.43
NME1-201ENST00000013034 LRRIQ4A6NIV6 560 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 TMEM189-UBE2V1I3L0A0 370 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 PTGESO14684 152 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 N4BP3O15049 544 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 TBC1D4O60343 1298 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 USO1O60763 962 aaKnown RBP12.33□□□□□ -0.44
NME1-201ENST00000013034 THP07101 528 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 SYT1P21579 422 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 STK3Q13188 491 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 FAM187BQ17R55 369 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 AXDND1Q5T1B0 1012 aaPredicted RBP12.33□□□□□ -0.44
NME1-201ENST00000013034 ZNF852Q6ZMS4 543 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 ZBTB8OSQ8IWT0 167 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 DNASE1L2Q92874 299 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 HSD17B14Q9BPX1 270 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 RTKNQ9BST9 563 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 IER2Q9BTL4 223 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 LMBRD1Q9NUN5 540 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 GDE1Q9NZC3 331 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 MTRRQ9UBK8 725 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 GMEB2Q9UKD1 530 aa12.33□□□□□ -0.44
NME1-201ENST00000013034 CACNA1BQ00975 2339 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 ADAM12O43184 909 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 RECQL4O94761 1208 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 F13A1P00488 732 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 CD72P21854 359 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 FGFR3P22607 806 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 PKP1Q13835 747 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 NAB2Q15742 525 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 MCPH1Q8NEM0 835 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 OXER1Q8TDS5 423 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 ING5Q8WYH8 240 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 ADPGKQ9BRR6 497 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 C2orf40Q9H1Z8 148 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 PDZD7Q9H5P4 517 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 AVENQ9NQS1 362 aaPredicted RBP12.32□□□□□ -0.44
NME1-201ENST00000013034 HCFC1R1Q9NWW0 138 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 DNMT3BQ9UBC3 853 aaKnown RBP12.32□□□□□ -0.44
NME1-201ENST00000013034 USP18Q9UMW8 372 aa12.32□□□□□ -0.44
NME1-201ENST00000013034 MRPS23Q9Y3D9 190 aaKnown RBP12.32□□□□□ -0.44
NME1-201ENST00000013034 LETM1O95202 739 aaPredicted RBP12.31□□□□□ -0.44
NME1-201ENST00000013034 OR1D2P34982 312 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 ATXN1P54253 815 aaKnown RBP12.31□□□□□ -0.44
NME1-201ENST00000013034 ADCY1Q08828 1119 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 PPP2R5DQ14738 602 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 CALCRLQ16602 461 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 TMEM132AQ24JP5 1023 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 LARP1BQ659C4 914 aaKnown RBP12.31□□□□□ -0.44
NME1-201ENST00000013034 ATL3Q6DD88 541 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 ANKS3Q6ZW76 656 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 ELSPBP1Q96BH3 223 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 FZD8Q9H461 694 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 ZSCAN16Q9H4T2 348 aaPredicted RBP12.31□□□□□ -0.44
NME1-201ENST00000013034 BRMS1Q9HCU9 246 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 HEBP1Q9NRV9 189 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 SNTG2Q9NY99 539 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 PCDHA12Q9UN75 941 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 BACE2Q9Y5Z0 518 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 CDY1Q9Y6F8 540 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 CACNA1IQ9P0X4 2223 aa12.31□□□□□ -0.44
NME1-201ENST00000013034 KMT2BQ9UMN6 2715 aaPredicted RBP12.3□□□□□ -0.44
NME1-201ENST00000013034 MAN2B1O00754 1011 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 NEMFO60524 1076 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 PRKCBP05771 671 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 RHOP08100 348 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 XRCC6P12956 609 aaKnown RBP eCLIP12.3□□□□□ -0.441e-7■□□□□ 10
NME1-201ENST00000013034 KRT2P35908 639 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 NRLP54845 237 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 ZNF445P59923 1031 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 SCRN1Q12765 414 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 PRPF4BQ13523 1007 aaKnown RBP12.3□□□□□ -0.44
NME1-201ENST00000013034 MAPK6Q16659 721 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 SLC5A9Q2M3M2 681 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 DCAF4L1Q3SXM0 396 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 EARS2Q5JPH6 523 aaKnown RBP12.3□□□□□ -0.44
NME1-201ENST00000013034 PIGOQ8TEQ8 1089 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 WASF1Q92558 559 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
NME1-201ENST00000013034 UROC1Q96N76 676 aa12.3□□□□□ -0.44
NME1-201ENST00000013034 CHRDQ9H2X0 955 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms