RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Frmd8Q3UFK8 466 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Foxred2Q3USW5 665 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 CpQ61147 1061 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Dennd2cQ6P9P8 914 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tmem117Q8BH18 514 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ubap1Q8BH48 502 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Fra10ac1Q8BP78 315 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pop1Q8K205 1045 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Usp14Q9JMA1 493 aaKnown RBP9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Akr1b10G5E895 316 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Pik3r1P26450 724 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ppp3ccP48455 513 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Rpusd2Q149F1 553 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 StilQ60988 1262 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Dcaf15Q6PFH3 600 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 GmipQ6PGG2 971 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tdpoz4Q6YCH2 370 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ush1gQ80T11 461 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Klhl38Q8BSF5 581 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Atg16l1Q8C0J2 607 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Trim31Q8R0K2 507 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 IkbipQ9DBZ1 373 aa9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Rfwd2Q9R1A8 733 aaKnown RBP9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Fxr2Q9WVR4 673 aaKnown RBP9.72□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Cul9Q80TT8 1865 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Aox3G3X982 1335 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Hoxa2P31245 372 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Cdca2Q14B71 982 aaKnown RBP9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Prmt9Q3U3W5 846 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Dars2Q8BIP0 653 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Elmo3Q8BYZ7 720 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Phc3Q8CHP6 981 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Scrn2Q8VCA8 425 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Hspbp1Q99P31 357 aaKnown RBP9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Abcb9Q9JJ59 762 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Fem1bQ9Z2G0 627 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Znf638Q61464 1960 aaKnown RBP9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Nfx1B1AY10 1114 aaKnown RBP9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 EsrraO08580 422 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Wfs1P56695 890 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tmem120bQ3TA38 339 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Mindy1Q76LS9 468 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 LnpkQ7TQ95 425 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Dppa3Q8QZY3 150 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 LrmdaQ9D9B4 229 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Slc5a4aQ9ET37 656 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 ArcQ9WV31 396 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Tjp2Q9Z0U1 1167 aaKnown RBP9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Psmd10Q9Z2X2 231 aa9.71□□□□□ -0.85
Scn8a-213ENSMUST00000201549 Ppef2O35385 757 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 KitP05532 979 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Slc16a1P53986 493 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Scnn1aQ61180 699 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Enoph1Q8BGB7 257 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Q8BGN9 141 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Mtrf1lQ8BJU9 373 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gga3Q8BMI3 718 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 A430089I19RikQ8C9W1 407 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Cog3Q8CI04 820 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ipo11Q8K2V6 975 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Uchl3Q9JKB1 230 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Trpc4Q9QUQ5 974 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Entpd5Q9WUZ9 427 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 PapolbQ9WVP6 641 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Hsf3D0VYS2 492 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Psmc5P62196 406 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Pik3r5Q5SW28 871 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 PnocQ64387 187 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rpf1Q7TND5 349 aaKnown RBP9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rhot1Q8BG51 631 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Trip10Q8CJ53 603 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tdrd3Q91W18 743 aaKnown RBP9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 WaslQ91YD9 501 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Aipl1Q924K1 328 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 YwhabQ9CQV8 246 aaKnown RBP9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 CluhQ5SW19 1315 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Map2P20357 1828 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Cd72P21855 354 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rcn1Q05186 325 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gcnt1Q09324 428 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ankmy2Q3TPE9 440 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Prdm4Q80V63 803 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ccdc137Q8R0K4 290 aaKnown RBP9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ttc8Q8VD72 515 aa9.71□□□□□ -0.86
Scn8a-213ENSMUST00000201549 C87977A2A958 498 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Klhl41A2AUC9 606 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Vamp7P70280 220 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gdf10P97737 476 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Patl1Q3TC46 770 aaKnown RBP9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ece1Q4PZA2 769 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 SpdyaQ5IBH7 310 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Antxr2Q6DFX2 487 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 SnphQ80U23 495 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Fkbp6Q91XW8 327 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Scgb2b11A0A087WR49 112 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Foxn2E9Q7L6 429 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ccdc51Q3URS9 406 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Oog4Q4G0C7 502 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tas2r134Q7TQB0 298 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Spire2Q8K1S6 718 aa9.7□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms