RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Lrrc71Q9D3W5 558 aa8.85□□□□□ -0.99
Trim40-203ENSMUST00000172711 Fzd5Q9EQD0 585 aa8.85□□□□□ -0.99
Trim40-203ENSMUST00000172711 Dnajb1Q9QYJ3 340 aaKnown RBP8.85□□□□□ -0.99
Trim40-203ENSMUST00000172711 Epm2aQ9WUA5 330 aa8.85□□□□□ -0.99
Trim40-203ENSMUST00000172711 Stxbp4Q9WV89 557 aa8.85□□□□□ -0.99
Trim40-203ENSMUST00000172711 Wdfy4E9Q2M9 3149 aa8.85□□□□□ -0.99
Trim40-203ENSMUST00000172711 BptfA2A654 3036 aaKnown RBP8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Igkv16-104A0A0B4J1I1 116 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Gm12695A2AGB2 545 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Cyp2b13A6H6J2 491 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 1700018F24RikB2RW27 314 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Gm5134E9QAB5 671 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Arhgap6O54834 987 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Orc4O88708 433 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Scrg1O88745 98 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Cyp8b1O88962 500 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Paxbp1P58501 919 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Scarf2P59222 833 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Sec1P97353 368 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Hace1Q3U0D9 909 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Snx25Q3ZT31 840 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Gm14851Q5ERJ0 116 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Klra4Q60651 263 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Arhgap11aQ80Y19 987 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Slc17a8Q8BFU8 601 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Prkag3Q8BGM7 489 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Mrps27Q8BK72 415 aaKnown RBP8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Me3Q8BMF3 604 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Qsox1Q8BND5 748 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Samd7Q8C8Y5 445 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Dnajc14Q921R4 703 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Mrps25Q9D125 171 aaKnown RBP8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Dnaaf1Q9D2H9 634 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Tlr2Q9QUN7 784 aa8.84□□□□□ -0.99
Trim40-203ENSMUST00000172711 Prune2Q52KR3 3084 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Itpr1P11881 2749 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Trim30dE9PWL0 497 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Rhox13F6YCR7 232 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 TnfP06804 235 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Gdf6P43028 454 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 B3gat3P58158 335 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Setd4P58467 439 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Wbp1P97764 304 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Epha2Q03145 977 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Tekt4Q149S1 447 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 DSCC1Q14AI0 399 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Adamts18Q4VC17 1219 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Cdc37Q61081 379 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Slc26a2Q62273 739 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 KaznQ69ZS8 779 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Heatr6Q6P1G0 1184 aaKnown RBP8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Paqr9Q6TCG2 375 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Cfap97Q6ZPR1 541 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Olfr412Q7TRW7 312 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 CslQ80X68 466 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 SowahaQ8BLS7 548 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Phka2Q8BWJ3 1235 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Lin9Q8C735 542 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Tbc1d10cQ8C9V1 444 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Cchcr1Q8K2I2 770 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Mical1Q8VDP3 1048 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Rsph1Q8VIG3 301 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Mlf2Q99KX1 247 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Tnpo2Q99LG2 887 aaKnown RBP8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Ino80bQ99PT3 375 aaKnown RBP8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Snx10Q9CWT3 201 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Q9D2Q3 444 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Snrnp35Q9D384 244 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 Atg7Q9D906 698 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 AmfrQ9R049 643 aa8.83□□□□□ -1
Trim40-203ENSMUST00000172711 CitP49025 2055 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Elmsan1E9Q2I4 1089 aaKnown RBP8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Gm17535J3KMR8 224 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Efna5O08543 228 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Eef2kO08796 724 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Adam19O35674 920 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Api5O35841 504 aaKnown RBP8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Dsg2O55111 1122 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 DtnbO70585 659 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Zfp1P08042 402 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Hoxd12P23812 268 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 U2af2P26369 475 aaKnown RBP8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Nudt1P53368 156 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Fgfr4Q03142 799 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Fut7Q11131 389 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Zfp791Q497V9 528 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 SynaQ5G5D5 617 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Sp9Q64HY3 484 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 OcrlQ6NVF0 900 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Ppp2r5aQ6PD03 486 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Olfr392Q7TRX6 312 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Pum1Q80U78 1189 aaKnown RBP8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Thap3Q8BJ25 218 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Mtmr3Q8K296 1196 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Usp15Q8R5H1 981 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Cep57l1Q8VDS7 400 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Cyp2c70Q91W64 489 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Sfxn1Q99JR1 322 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 Sdcbp2Q99JZ0 292 aa8.82□□□□□ -1
Trim40-203ENSMUST00000172711 CmasQ99KK2 432 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms