RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Snip1Q8BIZ6 383 aaKnown RBP11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ccdc90bQ8C3X2 256 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tmem145Q8C4U2 746 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 OtoaQ8K561 1137 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Abca14E9Q8F8 1683 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Nwd1A6H603 1563 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Gm382B1AXN3 1250 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 E2f6O54917 272 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Gdf10P97737 476 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Parp3Q3ULW8 533 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tpd52Q62393 224 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Usp17leQ7M764 540 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Celf6Q7TN33 460 aaKnown RBP11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 HpdlQ8K248 371 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ddx18Q8K363 660 aaKnown RBP11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 GOLGA7BQ9D428 167 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Etnk1Q9D4V0 363 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Capn9Q9D805 690 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tob2Q9JM55 345 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tjp3Q9QXY1 905 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Pdcd7Q9WTY1 482 aa11.66□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Usp31E9Q6Y8 1344 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Kif6E9PX57 802 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Top3aO70157 1003 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Cd86P42082 309 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tc2nQ91XT6 489 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Anxa13Q99JG3 317 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Cdc42ep4Q9JM96 349 aaKnown RBP11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Qser1A2BIE1 1698 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Fgd3O88842 733 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 KitP05532 979 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 EsrrgP62509 458 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Krt86P97861 486 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Inf2Q0GNC1 1273 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tspyl5Q69ZB3 406 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Zfp512bQ6PHP4 879 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Snx16Q8C080 344 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 PdxkQ8K183 312 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ces4aQ8R0W5 563 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Snap47Q8R570 413 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Pcdhb11Q91UZ8 797 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Fgfr1op2Q9CRA9 253 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Fads3Q9JJE7 449 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Dnajc7Q9QYI3 494 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ddx39bQ9Z1N5 428 aaKnown RBP11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tcp11x2A2AEI7 503 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Mxi1P50540 228 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 YwhahP68510 246 aaKnown RBP11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Bcar1Q61140 874 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ano5Q75UR0 904 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Fam102bQ8BQS4 339 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 E4f1Q8CCE9 783 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 ChiaQ91XA9 473 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Eif3dO70194 548 aaKnown RBP11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tshz1Q5DTH5 1084 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 PighQ5M9N4 188 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Q8BWG4 1187 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 HlcsQ920N2 722 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Mrpl2Q9D773 306 aaKnown RBP11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tekt1Q9DAJ2 418 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Klra17Q9JMA4 273 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tspan3Q9QY33 253 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Nrxn1Q9CS84 1514 aa11.65□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Cdh18E9Q9Q6 790 aa11.65□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Zfp850J3QPC5 689 aa11.65□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Afg1lQ3V384 480 aa11.65□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Olfr121Q5CZY0 321 aa11.65□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Ppme1Q8BVQ5 386 aa11.65□□□□□ -0.55
Scn8a-203ENSMUST00000108908 FdpsQ920E5 353 aa11.65□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Trpv2Q9WTR1 756 aa11.65□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Pdzd8B9EJ80 1147 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 LmnaP48678 665 aaKnown RBP11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Rab6bP61294 208 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 DaglaQ6WQJ1 1044 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Ipo11Q8K2V6 975 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Q9D1F3 157 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Q9D937 123 aaKnown RBP11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Stau1Q9Z108 487 aaKnown RBP11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Zfp984A2A7A2 547 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Sptlc1O35704 473 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Sstr3P30935 428 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Kcnn2P58390 839 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Zfp956Q3UZY6 572 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Ppp4r3cQ3V0Y1 813 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 CgasQ8C6L5 507 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Lrit1Q8K099 624 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Ccdc92Q8VDN4 314 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Tceal1Q921P9 165 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 ArhgdiaQ99PT1 204 aaKnown RBP11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Golph3Q9CRA5 298 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Sept5Q9Z2Q6 369 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Cdr2lA2A6T1 465 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Ccdc144bE9PVZ3 520 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Serpinh1P19324 417 aaKnown RBP11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Pcsk1P63239 753 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Rnf139Q7TMV1 668 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Ckap2lQ7TS74 745 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Trmt2aQ8BNV1 574 aaKnown RBP11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Q8K2W9 541 aa11.64□□□□□ -0.55
Scn8a-203ENSMUST00000108908 Trub2Q91WG3 331 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms