RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Scnn1aQ61180 699 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Znf598Q80YR4 908 aaKnown RBP9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Prkag2Q91WG5 566 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Aipl1Q924K1 328 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ccdc130Q9D516 385 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 AvenQ9D9K3 342 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Lzts3A2AHG0 700 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Oip5A2AQ14 241 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ppef2O35385 757 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Akap10O88845 662 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 PorP37040 678 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Enoph1Q8BGB7 257 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ano4Q8C5H1 955 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Sik2Q8CFH6 931 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rmnd1Q8CI78 450 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Kbtbd4Q8R179 534 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 SmapQ9R0P4 181 aaKnown RBP9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Gm13084A2A8N0 494 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Gm5483B2RV77 97 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rfx8D3YU81 596 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Epha7Q61772 998 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ccdc85bQ6PDY0 202 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Tmem59lQ7TNI2 337 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Cpa1Q7TPZ8 419 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Kbtbd3Q8BHI4 607 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Nup93Q8BJ71 819 aaKnown RBP9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Fam160b1Q8CDM8 764 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 DtnaQ9D2N4 746 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Dkc1Q9ESX5 509 aaKnown RBP9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Cdc42ep4Q9JM96 349 aaKnown RBP9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Abhd2Q9QXM0 425 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 PtpruB1AUH1 1446 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rnf17Q99MV7 1640 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Spout1Q3UHX9 385 aaKnown RBP9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Prkaa1Q5EG47 559 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Map2k2Q63932 401 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 SgczQ8BX51 311 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Pnma1Q8C1C8 353 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rnf31Q924T7 1066 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 PtsQ9R1Z7 144 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 CemipQ8BI06 1361 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 C2cd2E9Q3C1 696 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Kifc3O35231 824 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Xlr3aQ60595 226 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ing3Q8VEK6 421 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ugp2Q91ZJ5 508 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Nme5Q99MH5 211 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Tube1Q9D6T1 475 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 EtfbQ9DCW4 255 aaKnown RBP9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 CpdO89001 1377 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Pms2P54279 859 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 PighQ5M9N4 188 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Psmd10Q9Z2X2 231 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Abca8bQ8K440 1620 aa9.85□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rreb1Q3UH06 1700 aaKnown RBP9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Gm3173A6NAS3 172 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Gm3020E9Q3J7 150 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Gm2897K7N6T7 172 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ssxb10Q6XAR7 170 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Zbed4Q80WQ9 1168 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Q8BGD0 127 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Gm3411Q8C7R2 150 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Vmn1r213Q8R278 384 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Josd2Q9CR30 188 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 C1qtnf1Q9QXP7 281 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Etnk2A7MCT6 385 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Zfp850J3QPC5 689 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rev1Q920Q2 1249 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Olfr711Q9EPG2 314 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ddx39bQ9Z1N5 428 aaKnown RBP9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Lrrc8dQ8BGR2 859 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Gcfc2Q8BKT3 769 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Smtnl2Q8CI12 456 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Btbd6Q8K2J9 488 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Vmn1r191Q8K4D0 298 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Tesk2Q8VCT9 570 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Mad2l2Q9D752 211 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Ube4bQ9ES00 1173 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Scgb2b20Q9JI02 112 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Uchl3Q9JKB1 230 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Hecw1Q8K4P8 1604 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Dhx35A2ACQ1 703 aaKnown RBP9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Nfx1B1AY10 1114 aaKnown RBP9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Maml3D4QGC2 1135 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Serpinb3aG3X9V8 387 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Casp4P70343 373 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Arhgef9Q3UTH8 516 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Mars2Q499X9 586 aaKnown RBP9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Cd180Q62192 661 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 HltfQ6PCN7 1003 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Peg10Q7TN75 958 aaKnown RBP9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Rhpn2Q8BWR8 686 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Cog3Q8CI04 820 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Lgi2Q8K4Z0 550 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Yipf1Q91VU1 306 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Pcdhgc5Q91XW9 944 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Pcdha10Q91Y20 946 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Fam162aQ9D6U8 155 aa9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 NvlQ9DBY8 855 aaKnown RBP9.84□□□□□ -0.83
Prpf40a-201ENSMUST00000076313 Capn10Q9ESK3 666 aa9.84□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms