RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Ccdc62E9PVD1 701 aa10.49□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Rbp3P49194 1234 aa10.49□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Kcnn2P58390 839 aa10.49□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Rit2P70425 217 aa10.49□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Phactr1Q2M3X8 580 aa10.49□□□□□ -0.73
Ldlr-201ENSMUST00000034713 MlxipQ2VPU4 917 aa10.49□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Tmem120bQ3TA38 339 aa10.49□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ccdc159Q8C963 411 aa10.49□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Nudcd3Q8R1N4 363 aa10.49□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Rpa1Q8VEE4 623 aaKnown RBP10.49□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Cuedc2Q9CXX9 284 aa10.49□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Apobec2Q9WV35 224 aa10.49□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ugt1a8D3Z748 530 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ugt1a10E9PXN7 530 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 MafgO54790 162 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Gnrh1P13562 90 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Vps4bP46467 444 aaKnown RBP10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 G3bp2P97379 482 aaKnown RBP10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Rcn1Q05186 325 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Tatdn3Q3U1C6 294 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Upf3bQ3ULL6 472 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Gm4952Q5FW57 296 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Slc10a5Q5PT54 434 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Nlrp14Q6B966 993 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Siglec10Q80ZE3 688 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ythdf3Q8BYK6 585 aaKnown RBP10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Efl1Q8C0D5 1127 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 CenpuQ8C4M7 410 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Wdr27Q8C5V5 780 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ppp1r11Q8K1L5 131 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Gps1Q99LD4 471 aaKnown RBP10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ing2Q9ESK4 281 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Mtmr1Q9Z2C4 669 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Gm28036V9GXJ1 658 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ddx60E9PZQ1 1711 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Pdzrn4E9PUZ9 1014 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 PhexP70669 749 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Meis3P97368 378 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 FancbQ5XJY6 703 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Dnaaf1Q9D2H9 634 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Mrps9Q9D7N3 390 aaKnown RBP10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ngly1Q9JI78 651 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Krt27Q9Z320 448 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Fam205a1D3YZF6 1314 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Olfr67F8VPJ8 320 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Casp2P29594 452 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Vamp7P70280 220 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Klra9Q2TJJ8 266 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Trappc3lQ4KL14 181 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Actl9Q8CG27 415 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Adprhl2Q8CG72 370 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Hars2Q99KK9 505 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Etnk1Q9D4V0 363 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Uchl3Q9JKB1 230 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 S1pr4Q9Z0L1 386 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Usp35M0QWN7 1009 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Sema4dO09126 861 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Soat2O88908 525 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 UrosP51163 265 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Wdr41Q3UDP0 460 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Klra5Q60652 266 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Alkbh8Q80Y20 664 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Morc4Q8BMD7 928 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Depdc1aQ8CIG0 804 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Oxnad1Q8VE38 311 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Zmynd10Q99ML0 440 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 RnmtQ9D0L8 465 aaKnown RBP10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Cul3Q9JLV5 768 aa10.48□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Patl2A2ARM1 529 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Tlk2O55047 718 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Pacsin1Q61644 441 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Tspyl5Q69ZB3 406 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Kctd3Q8BFX3 815 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 CcnyQ8BGU5 341 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ccdc151Q8BSN3 593 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Rmnd1Q8CI78 450 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Dusp19Q8K4T5 220 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Olfr390Q8VEZ7 311 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ubiad1Q9DC60 336 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Hic1Q9R1Y5 733 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Tjp2Q9Z0U1 1167 aaKnown RBP10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Igsf9bE9PZ19 1328 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Pitpnm2Q6ZPQ6 1335 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Top3aO70157 1003 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Orc4O88708 433 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Rps6P62754 249 aaKnown RBP10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Prkaa1Q5EG47 559 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Ece2Q80Z60 881 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Rnaseh2bQ80ZV0 308 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 MtrrQ8C1A3 696 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 FtcdQ91XD4 541 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Tor1aip1Q921T2 595 aaKnown RBP10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Taf11Q99JX1 211 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Cdk5rap3Q99LM2 503 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Gins2Q9D600 185 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 MsraQ9D6Y7 233 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 PodxlQ9R0M4 503 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Wdr46Q9Z0H1 622 aaKnown RBP10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Gm13084A2A8N0 494 aa10.47□□□□□ -0.73
Ldlr-201ENSMUST00000034713 Map7d3A2AEY4 876 aa10.47□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms