RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 CcnyQ8BGU5 341 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Daam1Q8BPM0 1077 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gprasp2Q8BUY8 826 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 HlfQ8BW74 295 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Cabcoco1Q8CDT7 208 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Nudcd3Q8R1N4 363 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ttc8Q8VD72 515 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gpsm2Q8VDU0 679 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ppp1r3aQ99MR9 1089 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ttc14Q9CSP9 761 aa11.29□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Pagr1bF6V0H0 108 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Sec23aQ01405 765 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Qrich1Q3UA37 777 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Kctd8Q50H33 476 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Klhdc10Q6PAR0 439 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ccnt2Q7TQK0 723 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Lca5Q80ST9 704 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Lrrc15Q80X72 579 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Tubgcp5Q8BKN5 1024 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Morc2bQ8C5W4 1022 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Lonp1Q8CGK3 949 aaKnown RBP11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Agr3Q8R3W7 165 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ccdc92Q8VDN4 314 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Dpp3Q99KK7 738 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Tex9Q9D845 387 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Llcfc1Q9D9P8 108 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Abcg8Q9DBM0 673 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 H2-OaQ9QWV1 250 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gm3173A6NAS3 172 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gm3020E9Q3J7 150 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gm2897K7N6T7 172 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Casq2O09161 415 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Bmpr2O35607 1038 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 PrphP15331 475 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Faf1P54731 649 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Eps8Q08509 821 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Upf3bQ3ULL6 472 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 P2rx5Q3UYI1 455 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Stxbp3Q60770 592 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Rab34Q64008 259 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Fam107aQ78TU8 144 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gm3411Q8C7R2 150 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Bcas3Q8CCN5 928 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Adrm1Q9JKV1 407 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Sall1Q9ER74 1322 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 JrklB2RRL2 523 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Magea4F2Z493 315 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Ifnb1P01575 182 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Got1P05201 413 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Sstr1P30873 391 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Psmc1P62192 440 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 ZyxQ62523 564 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Krt40Q6IFX3 439 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Igdcc3Q8BQC3 813 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Slc9b1Q8C0X2 565 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Atp2a1Q8R429 994 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Anapc4Q91W96 807 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Sapcd2Q9D818 391 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gyg1Q9R062 333 aa11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Wdr46Q9Z0H1 622 aaKnown RBP11.28□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gm6370A0A0G2JGX9 315 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Vwa5b1A9Z1V5 1215 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Gm6309L7N481 315 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Klf6O08584 283 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Grem2O88273 168 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Fam167bP17257 162 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 BtkP35991 659 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Tac1P41539 130 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Spata18Q0P557 537 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Nsun7Q14AW5 724 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Pbxip1Q3TVI8 727 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 SowahdQ8BY98 327 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Lrit1Q8K099 624 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Mmtag2Q99LX5 260 aaKnown RBP11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Trim16Q99PP9 556 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Nt5c3aQ9D020 331 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Scgb2b12S4R2L0 112 aa11.27□□□□□ -0.6
Rnf40-201ENSMUST00000033088 Cdr2lA2A6T1 465 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Patl2A2ARM1 529 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Zc3h7aE9PWW6 970 aaKnown RBP11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 PigrO70570 771 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Msh2P43247 935 aaKnown RBP11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 RalgdsQ03385 852 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Sfi1Q3UZY0 1216 aaKnown RBP11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 P3h1Q3V1T4 739 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tmem65Q4VAE3 234 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Zswim5Q80TC6 1188 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Dlg1Q811D0 905 aaKnown RBP11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ildr1Q8CBR1 537 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Acat1Q8QZT1 424 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Snf8Q9CZ28 258 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 1700016D06RikQ9DAA5 166 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 CsadQ9DBE0 493 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ap2b1Q9DBG3 937 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Wdr19Q3UGF1 1341 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pcdh11xF6ZNL5 1338 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 AurkbO70126 345 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Sept2P42208 361 aaKnown RBP11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Mcf2lQ64096 1149 aa11.27□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Cdc14aQ6GQT0 603 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms