RNA–Protein interactions for RNA: ENSMUST00000003599.8

Pcdhgb6-201, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhgb6, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb6-201ENSMUST00000003599 Cul1Q9WTX6 776 aa12.91□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Spef2Q8C9J3 1734 aa12.91□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Skint3A7TZF0 458 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Olfr743L7N1Y2 311 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Gm21962L7N280 338 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 AlbP07724 608 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Mov10P23249 1004 aaKnown RBP12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Vcam1P29533 739 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Mxi1P50540 228 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Surf6P70279 355 aaKnown RBP12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Tshz2Q68FE9 1030 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 MtbpQ8BJS8 894 aaKnown RBP12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Mageb18Q8BQR7 327 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Sept8Q8CHH9 429 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Micu3Q9CTY5 523 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Tjap1Q9DCD5 539 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Cacna2d3Q9Z1L5 1091 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Pitpnm2Q6ZPQ6 1335 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Kif20bQ80WE4 1774 aaKnown RBP12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Ugt1a8D3Z748 530 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Ugt1a10E9PXN7 530 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Prl2c3P04768 224 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Ap2a2P17427 938 aaKnown RBP12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Thumpd3P97770 505 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Zbtb16Q3UQ17 673 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Prr18Q6PAN7 307 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Ftsj1Q8CBC7 324 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Fubp1Q91WJ8 651 aaKnown RBP12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Ttc1Q91Z38 292 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Smc6Q924W5 1097 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Snx29Q9D3S3 818 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Chd4Q6PDQ2 1915 aaKnown RBP12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Gm5936A2BG95 728 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Gm5640A3KG49 728 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Nedd9O35177 833 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Sp8Q8BMJ8 486 aa12.9□□□□□ -0.34
Pcdhgb6-201ENSMUST00000003599 Zfp472B0V2W5 534 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 CraddO88843 199 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Gnl1P36916 607 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 PltpP55065 493 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Irf5P56477 497 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Serpina5P70458 405 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Q3KNL4 93 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Olfr8Q60892 310 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Myo6Q64331 1265 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Slitrk1Q810C1 696 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 3830403N18RikQ9D6C3 208 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 EtfbQ9DCW4 255 aaKnown RBP12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Ccdc194A0A140LIT1 234 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 PklrP53657 574 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Psmc6P62334 389 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Ogfod1Q3U0K8 545 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Plekha7Q3UIL6 1118 aaKnown RBP12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Nsun6Q7TS68 476 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Grik4Q8BMF5 956 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Tcaf1Q8BNE1 924 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 H6pdQ8CFX1 789 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Nxnl1Q8VC33 217 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Tc2nQ91XT6 489 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Apobec3Q99J72 440 aaKnown RBP12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Stx12Q9ER00 274 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Rab27aQ9ERI2 221 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Mdc1Q5PSV9 1707 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Fam205aA2APU8 1308 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Smim10l2aA0A0B4J1F8 78 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Gm43738A0A0G2JEA5 862 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Mboat4P0C7A3 435 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Atxn10P28658 475 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Abi2P62484 446 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Irf6P97431 467 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Ly9Q01965 654 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Tmtc1Q3UV71 942 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Utp14bQ6EJB6 756 aaKnown RBP12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Pan2Q8BGF7 1200 aaKnown RBP12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Snip1Q8BIZ6 383 aaKnown RBP12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 DpydQ8CHR6 1025 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Bud13Q8R149 637 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Usp15Q8R5H1 981 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 1700013H16RikQ9DAC5 291 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Zfp597E9Q6S0 419 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Zfp358E9Q8M1 571 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Aknad1E9Q8N6 675 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Dcpp3L7N259 170 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Ephb4P54761 987 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 9130409I23RikQ3TS87 320 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Pid1Q3UBG2 217 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Wdr41Q3UDP0 460 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 E330017A01RikQ8BU47 192 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Uba3Q8C878 462 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Capn9Q9D805 690 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Atp6v0a1Q9Z1G4 839 aaKnown RBP12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Rtl9Q32KG4 1339 aa12.89□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Men1O88559 611 aaKnown RBP12.88□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Slc1a1P51906 523 aa12.88□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Fam8a1Q3URQ4 399 aa12.88□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Nipa1Q8BHK1 323 aa12.88□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Ccz1Q8C1Y8 480 aa12.88□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 A430089I19RikQ8C9W1 407 aa12.88□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Lsm14bQ8CGC4 385 aaKnown RBP12.88□□□□□ -0.35
Pcdhgb6-201ENSMUST00000003599 Pde6cQ91ZQ1 861 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms