RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W AVT7P40501 490 aa3.33□□□□□ -1.88
SWI1YPL016W YAR1P46683 200 aa3.33□□□□□ -1.88
SWI1YPL016W BUL1P48524 976 aa3.33□□□□□ -1.88
SWI1YPL016W HRI1Q05905 244 aaKnown RBP3.33□□□□□ -1.88
SWI1YPL016W HRT1Q08273 121 aa3.33□□□□□ -1.88
SWI1YPL016W TPT1Q12272 230 aaKnown RBP3.33□□□□□ -1.88
SWI1YPL016W SNF8Q12483 233 aa3.33□□□□□ -1.88
SWI1YPL016W YLR361C-AQ3E795 98 aa3.33□□□□□ -1.88
SWI1YPL016W SCS22Q6Q595 175 aa3.33□□□□□ -1.88
SWI1YPL016W STF1P01098 86 aa3.32□□□□□ -1.88
SWI1YPL016W ATP5P09457 212 aa3.32□□□□□ -1.88
SWI1YPL016W BOS1P25385 244 aa3.32□□□□□ -1.88
SWI1YPL016W TIP20P33891 701 aa3.32□□□□□ -1.88
SWI1YPL016W YOX1P34161 385 aa3.32□□□□□ -1.88
SWI1YPL016W COS9P36034 407 aa3.32□□□□□ -1.88
SWI1YPL016W MRPL4P36517 319 aa3.32□□□□□ -1.88
SWI1YPL016W FMP23P38231 175 aa3.32□□□□□ -1.88
SWI1YPL016W CSL4P53859 292 aaPredicted RBP3.32□□□□□ -1.88
SWI1YPL016W GPD1Q00055 391 aaKnown RBP3.32□□□□□ -1.88
SWI1YPL016W YSA1Q01976 231 aa3.32□□□□□ -1.88
SWI1YPL016W VPS28Q02767 242 aa3.32□□□□□ -1.88
SWI1YPL016W ECM18Q04623 453 aa3.32□□□□□ -1.88
SWI1YPL016W FDH1Q08911 376 aa3.32□□□□□ -1.88
SWI1YPL016W FYV7Q12247 151 aa3.32□□□□□ -1.88
SWI1YPL016W YDL177CQ12257 170 aa3.32□□□□□ -1.88
SWI1YPL016W ILV1P00927 576 aaKnown RBP3.32□□□□□ -1.88
SWI1YPL016W GLN3P18494 730 aa3.32□□□□□ -1.88
SWI1YPL016W ERG6P25087 383 aaKnown RBP3.32□□□□□ -1.88
SWI1YPL016W RML2P32611 393 aa3.32□□□□□ -1.88
SWI1YPL016W AGP2P38090 596 aa3.32□□□□□ -1.88
SWI1YPL016W YBR071WP38243 211 aa3.32□□□□□ -1.88
SWI1YPL016W TAE1P38340 232 aa3.32□□□□□ -1.88
SWI1YPL016W RPF1P38805 295 aaKnown RBP3.32□□□□□ -1.88
SWI1YPL016W UME6P39001 836 aa3.32□□□□□ -1.88
SWI1YPL016W SNU13P39990 126 aaKnown RBP3.32□□□□□ -1.88
SWI1YPL016W YND1P40009 630 aa3.32□□□□□ -1.88
SWI1YPL016W PIC2P40035 300 aa3.32□□□□□ -1.88
SWI1YPL016W RRG9P40156 214 aa3.32□□□□□ -1.88
SWI1YPL016W MOG1P47123 218 aa3.32□□□□□ -1.88
SWI1YPL016W COQ5P49017 307 aa3.32□□□□□ -1.88
SWI1YPL016W GTR2P53290 341 aa3.32□□□□□ -1.88
SWI1YPL016W MET14Q02196 202 aa3.32□□□□□ -1.88
SWI1YPL016W ALG6Q12001 544 aaKnown RBP3.32□□□□□ -1.88
SWI1YPL016W YLR046CQ12253 270 aa3.32□□□□□ -1.88
SWI1YPL016W YOL114CQ12322 202 aa3.32□□□□□ -1.88
SWI1YPL016W PDX1P16451 410 aa3.32□□□□□ -1.88
SWI1YPL016W YCR099CP25657 155 aa3.32□□□□□ -1.88
SWI1YPL016W COS10P52924 374 aa3.32□□□□□ -1.88
SWI1YPL016W RMD9P53140 646 aaKnown RBP3.32□□□□□ -1.88
SWI1YPL016W SAY1P53324 424 aa3.32□□□□□ -1.88
SWI1YPL016W YIP3P53633 176 aa3.32□□□□□ -1.88
SWI1YPL016W TGL2P54857 326 aa3.32□□□□□ -1.88
SWI1YPL016W SPP2Q02521 185 aa3.32□□□□□ -1.88
SWI1YPL016W YOL073CQ08232 322 aa3.32□□□□□ -1.88
SWI1YPL016W MCK1P21965 375 aaKnown RBP3.31□□□□□ -1.88
SWI1YPL016W YIH1P25637 258 aa3.31□□□□□ -1.88
SWI1YPL016W SHE2P36068 246 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
SWI1YPL016W CHA4P43634 648 aa3.31□□□□□ -1.88
SWI1YPL016W ATG27P46989 271 aa3.31□□□□□ -1.88
SWI1YPL016W RSM23Q01163 450 aa3.31□□□□□ -1.88
SWI1YPL016W FCY1Q12178 158 aa3.31□□□□□ -1.88
SWI1YPL016W SCH9P11792 824 aaKnown RBP3.31□□□□□ -1.88
SWI1YPL016W YCR100CP25606 316 aa3.31□□□□□ -1.88
SWI1YPL016W CNE1P27825 502 aa3.31□□□□□ -1.88
SWI1YPL016W MTR2P34232 184 aaKnown RBP3.31□□□□□ -1.88
SWI1YPL016W MTH1P35198 433 aa3.31□□□□□ -1.88
SWI1YPL016W PTK1P36002 662 aaPredicted RBP3.31□□□□□ -1.88
SWI1YPL016W EMC3P36039 253 aa3.31□□□□□ -1.88
SWI1YPL016W YIL067CP40514 678 aa3.31□□□□□ -1.88
SWI1YPL016W YJR011CP47086 261 aaPredicted RBP3.31□□□□□ -1.88
SWI1YPL016W TPS1Q00764 495 aaKnown RBP3.31□□□□□ -1.88
SWI1YPL016W YMR210WQ03649 449 aa3.31□□□□□ -1.88
SWI1YPL016W SPR28Q04921 423 aa3.31□□□□□ -1.88
SWI1YPL016W ARR3Q06598 404 aa3.31□□□□□ -1.88
SWI1YPL016W COX1P00401 534 aa3.31□□□□□ -1.88
SWI1YPL016W YML003WP0CF16 290 aa3.31□□□□□ -1.88
SWI1YPL016W YFL068WP0CX99 160 aa3.31□□□□□ -1.88
SWI1YPL016W YLL066W-AP0CY00 160 aa3.31□□□□□ -1.88
SWI1YPL016W YLL067W-AP0CY01 160 aa3.31□□□□□ -1.88
SWI1YPL016W DPM1P14020 267 aaKnown RBP3.31□□□□□ -1.88
SWI1YPL016W LSB5P25369 354 aa3.31□□□□□ -1.88
SWI1YPL016W ERG3P32353 365 aa3.31□□□□□ -1.88
SWI1YPL016W LRP1P38801 184 aaKnown RBP3.31□□□□□ -1.88
SWI1YPL016W EOS1P53938 366 aa3.31□□□□□ -1.88
SWI1YPL016W GOT1Q03554 138 aa3.31□□□□□ -1.88
SWI1YPL016W BER1Q06688 274 aaKnown RBP3.31□□□□□ -1.88
SWI1YPL016W ACK1Q07622 623 aaPredicted RBP3.31□□□□□ -1.88
SWI1YPL016W RRT7Q07829 113 aa3.31□□□□□ -1.88
SWI1YPL016W FRE7Q12333 620 aa3.31□□□□□ -1.88
SWI1YPL016W SAL1D6W196 494 aa3.3□□□□□ -1.88
SWI1YPL016W TPI1P00942 248 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W POR1P04840 283 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W PHO2P07269 559 aa3.3□□□□□ -1.88
SWI1YPL016W RPL14AP36105 138 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W MRPL16P38064 232 aa3.3□□□□□ -1.88
SWI1YPL016W RPL14BP38754 138 aaKnown RBP3.3□□□□□ -1.88
SWI1YPL016W SPC25P40014 221 aa3.3□□□□□ -1.88
SWI1YPL016W PAU15P40585 124 aa3.3□□□□□ -1.88
SWI1YPL016W SHR5P41912 237 aa3.3□□□□□ -1.88
SWI1YPL016W VNX1P42839 908 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms