RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W CDC10P25342 322 aaKnown RBP2.4□□□□□ -2.03
SRL1YOR247W GDH2P33327 1092 aaKnown RBP2.4□□□□□ -2.03
SRL1YOR247W PRP18P33411 251 aaPredicted RBP2.4□□□□□ -2.03
SRL1YOR247W AST1P35183 429 aa2.4□□□□□ -2.03
SRL1YOR247W YKL075CP36083 450 aa2.4□□□□□ -2.03
SRL1YOR247W RIB1P38066 345 aa2.4□□□□□ -2.03
SRL1YOR247W YBR096WP38256 230 aa2.4□□□□□ -2.03
SRL1YOR247W TEM1P38987 245 aa2.4□□□□□ -2.03
SRL1YOR247W SUR2P38992 349 aa2.4□□□□□ -2.03
SRL1YOR247W MRH4P53166 561 aa2.4□□□□□ -2.03
SRL1YOR247W YMR166CQ03829 368 aa2.4□□□□□ -2.03
SRL1YOR247W SLD7Q08457 257 aa2.4□□□□□ -2.03
SRL1YOR247W SMT3Q12306 101 aaKnown RBP2.4□□□□□ -2.03
SRL1YOR247W COS2P0CX12 379 aa2.39□□□□□ -2.03
SRL1YOR247W COS3P0CX13 379 aa2.39□□□□□ -2.03
SRL1YOR247W EHD3P28817 500 aa2.39□□□□□ -2.03
SRL1YOR247W YBL081WP38180 368 aaKnown RBP2.39□□□□□ -2.03
SRL1YOR247W COS4P43542 379 aa2.39□□□□□ -2.03
SRL1YOR247W YFR045WP43617 309 aa2.39□□□□□ -2.03
SRL1YOR247W RAD17P48581 401 aa2.39□□□□□ -2.03
SRL1YOR247W MIC26P50087 233 aa2.39□□□□□ -2.03
SRL1YOR247W GIM3P53900 129 aa2.39□□□□□ -2.03
SRL1YOR247W CDC123Q05791 360 aa2.39□□□□□ -2.03
SRL1YOR247W SSQ1Q05931 657 aaPredicted RBP2.39□□□□□ -2.03
SRL1YOR247W YPR063CQ12160 140 aa2.39□□□□□ -2.03
SRL1YOR247W YLR126CQ12288 251 aa2.39□□□□□ -2.03
SRL1YOR247W PRR2Q12310 699 aa2.39□□□□□ -2.03
SRL1YOR247W PST1Q12355 444 aa2.39□□□□□ -2.03
SRL1YOR247W CDC33P07260 213 aaKnown RBP2.38□□□□□ -2.03
SRL1YOR247W BCY1P07278 416 aaKnown RBP2.38□□□□□ -2.03
SRL1YOR247W SFC1P33303 322 aa2.38□□□□□ -2.03
SRL1YOR247W CBT1P36038 271 aaPredicted RBP2.38□□□□□ -2.03
SRL1YOR247W ERG28P40030 148 aa2.38□□□□□ -2.03
SRL1YOR247W ECO1P43605 281 aa2.38□□□□□ -2.03
SRL1YOR247W BUD13P46947 266 aaPredicted RBP2.38□□□□□ -2.03
SRL1YOR247W MCM22P47167 239 aa2.38□□□□□ -2.03
SRL1YOR247W NSA1P53136 463 aaPredicted RBP2.38□□□□□ -2.03
SRL1YOR247W FYV6P53913 173 aa2.38□□□□□ -2.03
SRL1YOR247W YPL039WQ03080 316 aa2.38□□□□□ -2.03
SRL1YOR247W MRPS17Q03246 237 aaPredicted RBP2.38□□□□□ -2.03
SRL1YOR247W SEI1Q06058 285 aa2.38□□□□□ -2.03
SRL1YOR247W HEM25Q07534 307 aa2.38□□□□□ -2.03
SRL1YOR247W YOR186WQ08560 144 aa2.38□□□□□ -2.03
SRL1YOR247W JIP3O13555 125 aa2.37□□□□□ -2.03
SRL1YOR247W RPL28P02406 149 aaKnown RBP2.37□□□□□ -2.03
SRL1YOR247W SPT3P06844 337 aa2.37□□□□□ -2.03
SRL1YOR247W URA8P38627 578 aaPredicted RBP2.37□□□□□ -2.03
SRL1YOR247W RTC3P38804 111 aaPredicted RBP2.37□□□□□ -2.03
SRL1YOR247W RFC4P40339 323 aaKnown RBP2.37□□□□□ -2.03
SRL1YOR247W YJL028WP47062 111 aa2.37□□□□□ -2.03
SRL1YOR247W CPR7P47103 393 aa2.37□□□□□ -2.03
SRL1YOR247W ILM1P47155 203 aa2.37□□□□□ -2.03
SRL1YOR247W TRM9P49957 279 aa2.37□□□□□ -2.03
SRL1YOR247W MIG2P53035 382 aa2.37□□□□□ -2.03
SRL1YOR247W ALG9P53868 555 aaKnown RBP2.37□□□□□ -2.03
SRL1YOR247W YML108WQ03759 105 aa2.37□□□□□ -2.03
SRL1YOR247W ATG38Q05789 226 aaKnown RBP2.37□□□□□ -2.03
SRL1YOR247W YOL019WQ08157 551 aa2.37□□□□□ -2.03
SRL1YOR247W GET4Q12125 312 aa2.37□□□□□ -2.03
SRL1YOR247W YRA1Q12159 226 aaKnown RBP2.37□□□□□ -2.03
SRL1YOR247W YKL183C-AQ3E765 70 aa2.37□□□□□ -2.03
SRL1YOR247W SAC3P46674 1301 aa2.37□□□□□ -2.03
SRL1YOR247W SNA3P14359 133 aa2.36□□□□□ -2.03
SRL1YOR247W IDH1P28834 360 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SRL1YOR247W RNP1P32385 249 aa2.36□□□□□ -2.03
SRL1YOR247W TKL2P33315 681 aa2.36□□□□□ -2.03
SRL1YOR247W NTF2P33331 125 aaKnown RBP2.36□□□□□ -2.03
SRL1YOR247W YER189WP40104 122 aa2.36□□□□□ -2.03
SRL1YOR247W YNL194CP40169 301 aa2.36□□□□□ -2.03
SRL1YOR247W YIL059CP40520 121 aa2.36□□□□□ -2.03
SRL1YOR247W OST3P48439 350 aa2.36□□□□□ -2.03
SRL1YOR247W CUS2P53830 285 aaPredicted RBP2.36□□□□□ -2.03
SRL1YOR247W YMR114CQ04471 368 aaKnown RBP2.36□□□□□ -2.03
SRL1YOR247W JLP1Q12358 412 aa2.36□□□□□ -2.03
SRL1YOR247W DCN1Q12395 269 aa2.36□□□□□ -2.03
SRL1YOR247W MRX4Q12467 430 aa2.36□□□□□ -2.03
SRL1YOR247W YBL112CQ3E7Y4 105 aa2.36□□□□□ -2.03
SRL1YOR247W PAN1P32521 1480 aa2.35□□□□□ -2.03
SRL1YOR247W ZWF1P11412 505 aaKnown RBP2.35□□□□□ -2.03
SRL1YOR247W CAB3P36076 571 aa2.35□□□□□ -2.03
SRL1YOR247W ECM14P38836 430 aa2.35□□□□□ -2.03
SRL1YOR247W NUP57P48837 541 aa2.35□□□□□ -2.03
SRL1YOR247W YNL046WP53956 172 aa2.35□□□□□ -2.03
SRL1YOR247W TLG1Q03322 224 aa2.35□□□□□ -2.03
SRL1YOR247W YPR011CQ12251 326 aa2.35□□□□□ -2.03
SRL1YOR247W TIM22Q12328 207 aa2.35□□□□□ -2.03
SRL1YOR247W IPP1P00817 287 aaKnown RBP2.34□□□□□ -2.03
SRL1YOR247W URA6P15700 204 aa2.34□□□□□ -2.03
SRL1YOR247W ERD2P18414 219 aa2.34□□□□□ -2.03
SRL1YOR247W PPH21P23594 369 aa2.34□□□□□ -2.03
SRL1YOR247W FMT1P32785 401 aa2.34□□□□□ -2.03
SRL1YOR247W PRY2P36110 329 aa2.34□□□□□ -2.03
SRL1YOR247W ECM13P38195 257 aa2.34□□□□□ -2.03
SRL1YOR247W YJR149WP47177 404 aa2.34□□□□□ -2.03
SRL1YOR247W CWC23P52868 283 aaPredicted RBP2.34□□□□□ -2.03
SRL1YOR247W BRR6P53062 197 aa2.34□□□□□ -2.03
SRL1YOR247W EMI1Q04406 187 aa2.34□□□□□ -2.03
SRL1YOR247W YDR114CQ04597 100 aa2.34□□□□□ -2.03
SRL1YOR247W YDR222WQ04925 415 aa2.34□□□□□ -2.03
SRL1YOR247W IES4Q08561 116 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms