RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W SLX9P53251 210 aaPredicted RBP5.36□□□□□ -1.55
VPS5YOR069W ERP1Q05359 219 aaKnown RBP5.36□□□□□ -1.55
VPS5YOR069W YLR456WQ06199 204 aa5.36□□□□□ -1.55
VPS5YOR069W SRO7Q12038 1033 aa5.36□□□□□ -1.55
VPS5YOR069W YLR118CQ12354 227 aa5.36□□□□□ -1.55
VPS5YOR069W PDE1P22434 369 aa5.36□□□□□ -1.55
VPS5YOR069W ATG15P25641 520 aa5.36□□□□□ -1.55
VPS5YOR069W EHD3P28817 500 aa5.36□□□□□ -1.55
VPS5YOR069W PRE2P30656 287 aaKnown RBP5.36□□□□□ -1.55
VPS5YOR069W PRO1P32264 428 aa5.36□□□□□ -1.55
VPS5YOR069W SEF1P34228 1148 aa5.36□□□□□ -1.55
VPS5YOR069W OAR1P35731 278 aa5.36□□□□□ -1.55
VPS5YOR069W MRPL11P36521 249 aaPredicted RBP5.36□□□□□ -1.55
VPS5YOR069W CHK1P38147 527 aa5.36□□□□□ -1.55
VPS5YOR069W FAT1P38225 669 aa5.36□□□□□ -1.55
VPS5YOR069W SUR2P38992 349 aa5.36□□□□□ -1.55
VPS5YOR069W YIL089WP40500 205 aa5.36□□□□□ -1.55
VPS5YOR069W CCC1P47818 322 aa5.36□□□□□ -1.55
VPS5YOR069W YGL235WP53071 178 aa5.36□□□□□ -1.55
VPS5YOR069W YIP4P53093 235 aa5.36□□□□□ -1.55
VPS5YOR069W TEX1P53851 422 aaKnown RBP5.36□□□□□ -1.55
VPS5YOR069W YDC1Q02896 317 aa5.36□□□□□ -1.55
VPS5YOR069W NRG1Q03125 231 aa5.36□□□□□ -1.55
VPS5YOR069W YML018CQ03730 393 aa5.36□□□□□ -1.55
VPS5YOR069W FDH1Q08911 376 aa5.36□□□□□ -1.55
VPS5YOR069W YPL272CQ08984 517 aa5.36□□□□□ -1.55
VPS5YOR069W TMA7Q3E764 64 aaKnown RBP5.36□□□□□ -1.55
VPS5YOR069W RPB5P20434 215 aa5.35□□□□□ -1.55
VPS5YOR069W PET18P25362 215 aa5.35□□□□□ -1.55
VPS5YOR069W SPT23P35210 1082 aa5.35□□□□□ -1.55
VPS5YOR069W PTC7P38797 343 aa5.35□□□□□ -1.55
VPS5YOR069W YEA6P39953 335 aa5.35□□□□□ -1.55
VPS5YOR069W AGE2P40529 298 aa5.35□□□□□ -1.55
VPS5YOR069W GLC8P41818 229 aa5.35□□□□□ -1.55
VPS5YOR069W IKS1P47042 667 aa5.35□□□□□ -1.55
VPS5YOR069W ASK10P48361 1146 aa5.35□□□□□ -1.55
VPS5YOR069W YGL262WP53054 175 aa5.35□□□□□ -1.55
VPS5YOR069W ERG26P53199 349 aaKnown RBP5.35□□□□□ -1.55
VPS5YOR069W MTM1P53320 366 aa5.35□□□□□ -1.55
VPS5YOR069W YPL014WQ02606 381 aa5.35□□□□□ -1.55
VPS5YOR069W CAB5Q03941 241 aa5.35□□□□□ -1.55
VPS5YOR069W HNT1Q04344 158 aaKnown RBP5.35□□□□□ -1.55
VPS5YOR069W YOR015WQ12169 119 aa5.35□□□□□ -1.55
VPS5YOR069W MMP1Q12372 583 aa5.35□□□□□ -1.55
VPS5YOR069W CKA1P15790 372 aa5.35□□□□□ -1.55
VPS5YOR069W MRPS9P38120 278 aa5.35□□□□□ -1.55
VPS5YOR069W TRS20P38334 175 aa5.35□□□□□ -1.55
VPS5YOR069W DMA1P38823 416 aa5.35□□□□□ -1.55
VPS5YOR069W AIR1P40507 360 aaKnown RBP5.35□□□□□ -1.55
VPS5YOR069W OST3P48439 350 aa5.35□□□□□ -1.55
VPS5YOR069W ACS2P52910 683 aaKnown RBP5.35□□□□□ -1.55
VPS5YOR069W PDR16P53860 351 aaKnown RBP5.35□□□□□ -1.55
VPS5YOR069W YDR248CQ03786 193 aa5.35□□□□□ -1.55
VPS5YOR069W TMN2Q04562 672 aa5.35□□□□□ -1.55
VPS5YOR069W ROY1Q04847 553 aa5.35□□□□□ -1.55
VPS5YOR069W RTT103Q05543 409 aa5.35□□□□□ -1.55
VPS5YOR069W TDA6Q06466 467 aa5.35□□□□□ -1.55
VPS5YOR069W SUL2Q12325 893 aa5.35□□□□□ -1.55
VPS5YOR069W SRF1Q12516 437 aa5.35□□□□□ -1.55
VPS5YOR069W MSB2P32334 1306 aa5.34□□□□□ -1.55
VPS5YOR069W SGA1P08019 549 aa5.34□□□□□ -1.55
VPS5YOR069W MET3P08536 511 aa5.34□□□□□ -1.55
VPS5YOR069W ATP5P09457 212 aa5.34□□□□□ -1.55
VPS5YOR069W PAU19P0CE85 124 aa5.34□□□□□ -1.55
VPS5YOR069W PAU21P0CE86 164 aa5.34□□□□□ -1.55
VPS5YOR069W PAU22P0CE87 164 aa5.34□□□□□ -1.55
VPS5YOR069W MATALPHA1P0CY06 175 aa5.34□□□□□ -1.55
VPS5YOR069W HMLALPHA1P0CY07 175 aa5.34□□□□□ -1.55
VPS5YOR069W MTF1P14908 341 aaKnown RBP5.34□□□□□ -1.55
VPS5YOR069W PAU3P25610 124 aa5.34□□□□□ -1.55
VPS5YOR069W MDH3P32419 343 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
VPS5YOR069W ELF1P36053 145 aa5.34□□□□□ -1.55
VPS5YOR069W ARC40P38328 384 aaKnown RBP5.34□□□□□ -1.55
VPS5YOR069W VBA2P38358 474 aaKnown RBP5.34□□□□□ -1.55
VPS5YOR069W FMP10P40098 244 aa5.34□□□□□ -1.55
VPS5YOR069W GAT2P40209 560 aa5.34□□□□□ -1.55
VPS5YOR069W RRD1P40454 393 aaKnown RBP5.34□□□□□ -1.55
VPS5YOR069W NSA1P53136 463 aaPredicted RBP5.34□□□□□ -1.55
VPS5YOR069W SAE3P89114 91 aa5.34□□□□□ -1.55
VPS5YOR069W RSM23Q01163 450 aa5.34□□□□□ -1.55
VPS5YOR069W ROT1Q03691 256 aa5.34□□□□□ -1.55
VPS5YOR069W ATC1Q04005 294 aa5.34□□□□□ -1.55
VPS5YOR069W YDL085C-AQ3E7B7 68 aaKnown RBP5.34□□□□□ -1.55
VPS5YOR069W STE4P18851 423 aa5.33□□□□□ -1.56
VPS5YOR069W ERG1P32476 496 aaKnown RBP5.33□□□□□ -1.56
VPS5YOR069W TIM12P32830 109 aa5.33□□□□□ -1.56
VPS5YOR069W SLC1P33333 303 aa5.33□□□□□ -1.56
VPS5YOR069W YEA4P40004 342 aa5.33□□□□□ -1.56
VPS5YOR069W PHS1P40857 217 aa5.33□□□□□ -1.56
VPS5YOR069W SCW4P53334 386 aaKnown RBP5.33□□□□□ -1.56
VPS5YOR069W OGG1P53397 376 aaPredicted RBP5.33□□□□□ -1.56
VPS5YOR069W SMM1P53720 384 aaKnown RBP5.33□□□□□ -1.56
VPS5YOR069W STD1Q02794 444 aa5.33□□□□□ -1.56
VPS5YOR069W MRP51Q02950 344 aa5.33□□□□□ -1.56
VPS5YOR069W SRL2Q12020 392 aa5.33□□□□□ -1.56
VPS5YOR069W VAM3Q12241 283 aa5.33□□□□□ -1.56
VPS5YOR069W SLY41P22215 453 aa5.33□□□□□ -1.56
VPS5YOR069W CPR2P23285 205 aa5.33□□□□□ -1.56
VPS5YOR069W DEG1P31115 442 aaKnown RBP5.33□□□□□ -1.56
VPS5YOR069W ALK2P32789 676 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms