RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	CPR2	P23285	205 aa		4.73	□□□□□ -1.65
CSL4	YNL232W	DGR2	P32330	852 aa		4.73	□□□□□ -1.65
CSL4	YNL232W	YKR015C	P36111	568 aa		4.73	□□□□□ -1.65
CSL4	YNL232W	IST2	P38250	946 aa		4.73	□□□□□ -1.65
CSL4	YNL232W	FLO5	P38894	1075 aa		4.73	□□□□□ -1.65
CSL4	YNL232W	PHO90	P39535	881 aa		4.73	□□□□□ -1.65
CSL4	YNL232W	NSA1	P53136	463 aa	Predicted RBP	4.73	□□□□□ -1.65
CSL4	YNL232W	WSC2	P53832	503 aa		4.73	□□□□□ -1.65
CSL4	YNL232W	ASI3	P53983	676 aa		4.73	□□□□□ -1.65
CSL4	YNL232W	DML1	Q03652	475 aa		4.73	□□□□□ -1.65
CSL4	YNL232W	YDR179W-A	Q03983	463 aa		4.73	□□□□□ -1.65
CSL4	YNL232W	RKM1	Q08961	583 aa	Predicted RBP	4.73	□□□□□ -1.65
CSL4	YNL232W	YDL009C	Q12210	107 aa		4.73	□□□□□ -1.65
CSL4	YNL232W	COX5B	P00425	151 aa		4.72	□□□□□ -1.65
CSL4	YNL232W	ATP6	P00854	259 aa		4.72	□□□□□ -1.65
CSL4	YNL232W	RAD52	P06778	471 aa	Known RBP	4.72	□□□□□ -1.65
CSL4	YNL232W	RAD7	P06779	565 aa		4.72	□□□□□ -1.65
CSL4	YNL232W	DSF1	P0CX08	502 aa		4.72	□□□□□ -1.65
CSL4	YNL232W	YNR073C	P0CX09	502 aa		4.72	□□□□□ -1.65
CSL4	YNL232W	FUS3	P16892	353 aa	Known RBP	4.72	□□□□□ -1.65
CSL4	YNL232W	FAR1	P21268	830 aa		4.72	□□□□□ -1.65
CSL4	YNL232W	BOS1	P25385	244 aa		4.72	□□□□□ -1.65
CSL4	YNL232W	GDH2	P33327	1092 aa	Known RBP	4.72	□□□□□ -1.65
CSL4	YNL232W	SRO77	P38163	1010 aa		4.72	□□□□□ -1.65
CSL4	YNL232W	ARO9	P38840	513 aa	Predicted RBP	4.72	□□□□□ -1.65
CSL4	YNL232W	SLM1	P40485	686 aa		4.72	□□□□□ -1.65
CSL4	YNL232W	OST1	P41543	476 aa	Known RBP	4.72	□□□□□ -1.65
CSL4	YNL232W	ATC1	Q04005	294 aa		4.72	□□□□□ -1.65
CSL4	YNL232W	MCH4	Q08268	501 aa		4.72	□□□□□ -1.65
CSL4	YNL232W	THP2	O13539	261 aa	Known RBP	4.71	□□□□□ -1.66
CSL4	YNL232W	YOL162W	P0CF19	215 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	NAM2	P11325	894 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	CLB4	P24871	460 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	YCR016W	P25617	290 aa	Known RBP	4.71	□□□□□ -1.66
CSL4	YNL232W	GSH1	P32477	678 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	SIP2	P34164	415 aa	Known RBP	4.71	□□□□□ -1.66
CSL4	YNL232W	HOT13	P36078	116 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	YBR241C	P38142	488 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	SSZ1	P38788	538 aa	Known RBP	4.71	□□□□□ -1.66
CSL4	YNL232W	WSS1	P38838	269 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	MSS2	P40990	351 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	IRC5	P43610	853 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	BAT2	P47176	376 aa	Known RBP	4.71	□□□□□ -1.66
CSL4	YNL232W	YDC1	Q02896	317 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	UTP15	Q04305	513 aa	Known RBP	4.71	□□□□□ -1.66
CSL4	YNL232W	NSL1	Q12143	216 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	SIA1	Q12212	622 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	MED4	Q12343	284 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	POM34	Q12445	299 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	YBR126W-A	Q8TGU7	68 aa		4.71	□□□□□ -1.66
CSL4	YNL232W	MSW1	P04803	379 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	OPI3	P05375	206 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	MRPS28	P21771	286 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	BUD5	P25300	642 aa	Predicted RBP	4.7	□□□□□ -1.66
CSL4	YNL232W	SUA5	P32579	426 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	SSE2	P32590	693 aa	Known RBP	4.7	□□□□□ -1.66
CSL4	YNL232W	MTC7	P32633	139 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	NUF2	P33895	451 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	RCY1	P39531	840 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	YER184C	P39961	794 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	UFD1	P53044	361 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	COG2	P53271	262 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	YMR166C	Q03829	368 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	SWT1	Q12104	458 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	YDL199C	Q12407	687 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	YOL159C-A	Q3E769	90 aa		4.7	□□□□□ -1.66
CSL4	YNL232W	NFT1	P0CE68	1218 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	CSM1	P25651	190 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	MLH1	P38920	769 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	PET100	P38958	111 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	MPM1	P40364	252 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	TAF4	P50105	388 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	HSP31	Q04432	237 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	YDR114C	Q04597	100 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	GTO3	Q04806	366 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	YLR173W	Q06247	608 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	THP1	Q08231	455 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	YOR029W	Q12243	111 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	YPT6	Q99260	215 aa		4.69	□□□□□ -1.66
CSL4	YNL232W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
CSL4	YNL232W	YME2	P32843	850 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	YOX1	P34161	385 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	MCH2	P36032	473 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	ELF1	P36053	145 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	ATP3	P38077	311 aa	Known RBP	4.68	□□□□□ -1.66
CSL4	YNL232W	CUE1	P38428	203 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	HPM1	P40481	377 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	IAH1	P41734	238 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	TDA10	P42938	290 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	LOH1	P47055	219 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	RMD9	P53140	646 aa	Known RBP	4.68	□□□□□ -1.66
CSL4	YNL232W	RNH201	P53942	307 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	NGL2	Q03264	515 aa	Known RBP	4.68	□□□□□ -1.66
CSL4	YNL232W	RTT103	Q05543	409 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	GEP3	Q08622	556 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	VIK1	Q12045	647 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	WTM1	Q12363	437 aa	Known RBP	4.68	□□□□□ -1.66
CSL4	YNL232W	YMR105W-A	Q8TGS8	64 aa		4.68	□□□□□ -1.66
CSL4	YNL232W	TAL1	P15019	335 aa	Known RBP	4.67	□□□□□ -1.66
CSL4	YNL232W	SUA7	P29055	345 aa	Predicted RBP	4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms