RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W MSS1P32559 526 aaPredicted RBP5.19□□□□□ -1.58
ATG4YNL223W MOH1P38191 138 aa5.19□□□□□ -1.58
ATG4YNL223W YBR096WP38256 230 aa5.19□□□□□ -1.58
ATG4YNL223W UMP1P38293 148 aa5.19□□□□□ -1.58
ATG4YNL223W YGL159WP53110 370 aa5.19□□□□□ -1.58
ATG4YNL223W TYW3P53177 273 aa5.19□□□□□ -1.58
ATG4YNL223W ORM1P53224 222 aa5.19□□□□□ -1.58
ATG4YNL223W YNR040WP53736 256 aa5.19□□□□□ -1.58
ATG4YNL223W HHT1P61830 136 aa5.19□□□□□ -1.58
ATG4YNL223W RSM23Q01163 450 aa5.19□□□□□ -1.58
ATG4YNL223W RPL6AQ02326 176 aaKnown RBP5.19□□□□□ -1.58
ATG4YNL223W DIG2Q03373 323 aaKnown RBP5.19□□□□□ -1.58
ATG4YNL223W YDR387CQ04162 555 aa5.19□□□□□ -1.58
ATG4YNL223W VBA1Q04301 562 aa5.19□□□□□ -1.58
ATG4YNL223W YLR283WQ05867 314 aa5.19□□□□□ -1.58
ATG4YNL223W HRI1Q05905 244 aaKnown RBP5.19□□□□□ -1.58
ATG4YNL223W YLR352WQ06479 807 aa5.19□□□□□ -1.58
ATG4YNL223W SRL2Q12020 392 aa5.19□□□□□ -1.58
ATG4YNL223W YDL180WQ12301 547 aa5.19□□□□□ -1.58
ATG4YNL223W PPZ2P33329 710 aa5.18□□□□□ -1.58
ATG4YNL223W FLO10P36170 1169 aa5.18□□□□□ -1.58
ATG4YNL223W MRPL27P36526 146 aaPredicted RBP5.18□□□□□ -1.58
ATG4YNL223W MRPL39P36533 70 aa5.18□□□□□ -1.58
ATG4YNL223W MTC6P38849 526 aa5.18□□□□□ -1.58
ATG4YNL223W ATF1P40353 525 aa5.18□□□□□ -1.58
ATG4YNL223W RSM27P53305 110 aa5.18□□□□□ -1.58
ATG4YNL223W HNT1Q04344 158 aaKnown RBP5.18□□□□□ -1.58
ATG4YNL223W COA4Q05809 96 aa5.18□□□□□ -1.58
ATG4YNL223W SEN1Q00416 2231 aaKnown RBP5.18□□□□□ -1.58
ATG4YNL223W IRA1P18963 3092 aa5.17□□□□□ -1.58
ATG4YNL223W DSF1P0CX08 502 aa5.17□□□□□ -1.58
ATG4YNL223W YNR073CP0CX09 502 aa5.17□□□□□ -1.58
ATG4YNL223W GAR1P28007 205 aaKnown RBP5.17□□□□□ -1.58
ATG4YNL223W APL3P38065 1025 aa5.17□□□□□ -1.58
ATG4YNL223W RRF1P38771 230 aa5.17□□□□□ -1.58
ATG4YNL223W YJL016WP47072 561 aa5.17□□□□□ -1.58
ATG4YNL223W TNA1P53322 534 aa5.17□□□□□ -1.58
ATG4YNL223W MRPL50P53724 139 aa5.17□□□□□ -1.58
ATG4YNL223W YAP6Q03935 383 aa5.17□□□□□ -1.58
ATG4YNL223W THI72Q08579 599 aa5.17□□□□□ -1.58
ATG4YNL223W IZH2Q12442 317 aa5.17□□□□□ -1.58
ATG4YNL223W TDH3P00359 332 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
ATG4YNL223W URA3P03962 267 aa5.16□□□□□ -1.58
ATG4YNL223W RPL7AP05737 244 aaKnown RBP5.16□□□□□ -1.58
ATG4YNL223W ARG80P07249 177 aa5.16□□□□□ -1.58
ATG4YNL223W MCM1P11746 286 aa5.16□□□□□ -1.58
ATG4YNL223W RPL30P14120 105 aaKnown RBP5.16□□□□□ -1.58
ATG4YNL223W CDC34P14682 295 aa5.16□□□□□ -1.58
ATG4YNL223W HNM1P19807 563 aa5.16□□□□□ -1.58
ATG4YNL223W VMA5P31412 392 aaKnown RBP5.16□□□□□ -1.58
ATG4YNL223W FMT1P32785 401 aa5.16□□□□□ -1.58
ATG4YNL223W GLY1P37303 387 aaKnown RBP5.16□□□□□ -1.58
ATG4YNL223W SIT1P39980 628 aa5.16□□□□□ -1.58
ATG4YNL223W IDP2P41939 412 aa5.16□□□□□ -1.58
ATG4YNL223W LSM1P47017 172 aaKnown RBP5.16□□□□□ -1.58
ATG4YNL223W AVT4P50944 713 aa5.16□□□□□ -1.58
ATG4YNL223W YNR048WP53740 393 aa5.16□□□□□ -1.58
ATG4YNL223W ELA1P53861 379 aaPredicted RBP5.16□□□□□ -1.58
ATG4YNL223W GIM3P53900 129 aa5.16□□□□□ -1.58
ATG4YNL223W ARG5,6Q01217 863 aa5.16□□□□□ -1.58
ATG4YNL223W PLP1Q04004 230 aa5.16□□□□□ -1.58
ATG4YNL223W ORM2Q06144 216 aa5.16□□□□□ -1.58
ATG4YNL223W RPL7BQ12213 244 aaKnown RBP5.16□□□□□ -1.58
ATG4YNL223W PHO2P07269 559 aa5.15□□□□□ -1.58
ATG4YNL223W PUT1P09368 476 aa5.15□□□□□ -1.58
ATG4YNL223W PET122P10355 254 aa5.15□□□□□ -1.58
ATG4YNL223W CKS1P20486 150 aaKnown RBP5.15□□□□□ -1.58
ATG4YNL223W ATG15P25641 520 aa5.15□□□□□ -1.58
ATG4YNL223W MRP17P28778 131 aa5.15□□□□□ -1.58
ATG4YNL223W AGA2P32781 87 aa5.15□□□□□ -1.58
ATG4YNL223W VAM7P32912 316 aa5.15□□□□□ -1.58
ATG4YNL223W YMR262WP38430 313 aa5.15□□□□□ -1.58
ATG4YNL223W YND1P40009 630 aa5.15□□□□□ -1.58
ATG4YNL223W YER137CP40083 148 aaKnown RBP5.15□□□□□ -1.58
ATG4YNL223W NSA1P53136 463 aaPredicted RBP5.15□□□□□ -1.58
ATG4YNL223W RPN14P53196 417 aa5.15□□□□□ -1.58
ATG4YNL223W GTF1P53260 183 aaPredicted RBP5.15□□□□□ -1.58
ATG4YNL223W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.15□□□□□ -1.58not detected
ATG4YNL223W MRX9Q07349 420 aaKnown RBP5.15□□□□□ -1.58
ATG4YNL223W YNG1Q08465 219 aa5.15□□□□□ -1.58
ATG4YNL223W TRM13Q12383 476 aa5.15□□□□□ -1.58
ATG4YNL223W ERP4Q12450 207 aa5.15□□□□□ -1.58
ATG4YNL223W AAC1P04710 309 aa5.14□□□□□ -1.59
ATG4YNL223W RFA1P22336 621 aaKnown RBP5.14□□□□□ -1.59
ATG4YNL223W CPR4P25334 318 aa5.14□□□□□ -1.59
ATG4YNL223W YCR016WP25617 290 aaKnown RBP5.14□□□□□ -1.59
ATG4YNL223W RFA3P26755 122 aaKnown RBP5.14□□□□□ -1.59
ATG4YNL223W YBL010CP32788 280 aa5.14□□□□□ -1.59
ATG4YNL223W MRPS5P33759 307 aa5.14□□□□□ -1.59
ATG4YNL223W YKL063CP35725 167 aa5.14□□□□□ -1.59
ATG4YNL223W MRPL36P36531 177 aa5.14□□□□□ -1.59
ATG4YNL223W QDR1P40475 563 aa5.14□□□□□ -1.59
ATG4YNL223W SYG1P40528 902 aa5.14□□□□□ -1.59
ATG4YNL223W MOB2P43563 287 aa5.14□□□□□ -1.59
ATG4YNL223W ACS2P52910 683 aaKnown RBP5.14□□□□□ -1.59
ATG4YNL223W OKP1P53298 406 aa5.14□□□□□ -1.59
ATG4YNL223W RCE1Q03530 315 aa5.14□□□□□ -1.59
ATG4YNL223W SPR28Q04921 423 aa5.14□□□□□ -1.59
ATG4YNL223W SYM1Q06563 197 aa5.14□□□□□ -1.59
ATG4YNL223W RAF1Q06891 181 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms