RNA–Protein interactions for RNA: YKR002W

PAP1, Transcript of Poly(A) polymerase, yeast

Gene PAP1, Length 1,707 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAP1	YKR002W	JEN1	P36035	616 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	HAC1	P41546	238 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	VAC7	P53950	1165 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	RIF2	Q06208	395 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	GRE1	Q08969	168 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	PER33	Q12144	273 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	YCT1	Q12235	531 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	FOL3	Q12676	427 aa	Predicted RBP	4.94	□□□□□ -1.62
PAP1	YKR002W	RFA3	P26755	122 aa	Known RBP	4.94	□□□□□ -1.62
PAP1	YKR002W	SPS19	P32573	292 aa	Known RBP	4.94	□□□□□ -1.62
PAP1	YKR002W	YJL213W	P40896	331 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	ERG10	P41338	398 aa	Known RBP	4.94	□□□□□ -1.62
PAP1	YKR002W	USE1	P53146	245 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	DIA1	P54005	336 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	GIM5	Q04493	163 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	MHR1	Q06630	226 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	DAS2	Q12084	232 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	SNU23	Q12368	194 aa	Predicted RBP	4.94	□□□□□ -1.62
PAP1	YKR002W	YER078W-A	Q3E7A2	54 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	YCL021W-A	Q96VH3	125 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	BI3	Q9ZZW7	517 aa		4.94	□□□□□ -1.62
PAP1	YKR002W	LTE1	P07866	1435 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	QCR7	P00128	127 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	HTB1	P02293	131 aa	Known RBP	4.93	□□□□□ -1.62
PAP1	YKR002W	HTB2	P02294	131 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	RPL27A	P0C2H6	136 aa	Known RBP	4.93	□□□□□ -1.62
PAP1	YKR002W	RPL27B	P0C2H7	136 aa	Known RBP	4.93	□□□□□ -1.62
PAP1	YKR002W	KSS1	P14681	368 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	CKA2	P19454	339 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	MRPL20	P22354	195 aa	Predicted RBP	4.93	□□□□□ -1.62
PAP1	YKR002W	YBL010C	P32788	280 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	CSE2	P33308	149 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	AST1	P35183	429 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	MTW1	P39731	289 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	AGE2	P40529	298 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	COS6	P53344	381 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	SKI8	Q02793	397 aa	Predicted RBP	4.93	□□□□□ -1.62
PAP1	YKR002W	GPI17	Q04080	534 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	GAS2	Q06135	555 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	ESA1	Q08649	445 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	SRL1	Q08673	210 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	DNF3	Q12674	1656 aa		4.93	□□□□□ -1.62
PAP1	YKR002W	AEP1	P32493	518 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	NTF2	P33331	125 aa	Known RBP	4.92	□□□□□ -1.62
PAP1	YKR002W	ECM31	P38122	312 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	NDT80	P38830	627 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	YFL067W	P43537	175 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	MGA1	P53050	456 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	ASI3	P53983	676 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	YMR114C	Q04471	368 aa	Known RBP	4.92	□□□□□ -1.62
PAP1	YKR002W	SFM1	Q12314	213 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	STF2	P16965	84 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	GIT1	P25346	518 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	ATG15	P25641	520 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	NAM9	P27929	486 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	YKL075C	P36083	450 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	ATG18	P43601	500 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	TMA20	P89886	181 aa	Predicted RBP	4.92	□□□□□ -1.62
PAP1	YKR002W	TPS1	Q00764	495 aa	Known RBP	4.92	□□□□□ -1.62
PAP1	YKR002W	YOR376W	Q08900	122 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	YPL150W	Q12152	901 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	EMP46	Q12396	444 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	AI5_BETA	Q9ZZX0	354 aa		4.92	□□□□□ -1.62
PAP1	YKR002W	VTH1	P40438	1549 aa		4.91	□□□□□ -1.62
PAP1	YKR002W	ATP7	P30902	174 aa		4.91	□□□□□ -1.62
PAP1	YKR002W	VMA10	P48836	114 aa	Known RBP	4.91	□□□□□ -1.62
PAP1	YKR002W	CRH1	P53301	507 aa		4.91	□□□□□ -1.62
PAP1	YKR002W	YNR066C	P53752	436 aa		4.91	□□□□□ -1.62
PAP1	YKR002W	RMI1	Q02685	241 aa		4.91	□□□□□ -1.62
PAP1	YKR002W	FSH2	Q05015	223 aa		4.91	□□□□□ -1.62
PAP1	YKR002W	RTR2	Q12378	196 aa		4.91	□□□□□ -1.62
PAP1	YKR002W	YPL119C-A	Q3E751	87 aa		4.91	□□□□□ -1.62
PAP1	YKR002W	CMC2	Q3E7A4	109 aa		4.91	□□□□□ -1.62
PAP1	YKR002W	YOR093C	Q12275	1648 aa		4.91	□□□□□ -1.62
PAP1	YKR002W	VTH2	P40890	1549 aa		4.9	□□□□□ -1.62
PAP1	YKR002W	YAK1	P14680	807 aa		4.9	□□□□□ -1.62
PAP1	YKR002W	RPB5	P20434	215 aa		4.9	□□□□□ -1.62
PAP1	YKR002W	MBA1	P38300	278 aa		4.9	□□□□□ -1.62
PAP1	YKR002W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
PAP1	YKR002W	EGD2	P38879	174 aa	Known RBP	4.9	□□□□□ -1.62
PAP1	YKR002W	COX15	P40086	486 aa		4.9	□□□□□ -1.62
PAP1	YKR002W	ALG13	P53178	202 aa		4.9	□□□□□ -1.62
PAP1	YKR002W	YMR010W	Q03687	405 aa		4.9	□□□□□ -1.62
PAP1	YKR002W	STE7	P06784	515 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	CMK2	P22517	447 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	YCR025C	P25352	136 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	CLG1	P35190	452 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	RFS1	P38234	210 aa	Known RBP	4.89	□□□□□ -1.63
PAP1	YKR002W	MDM31	P38880	579 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	MIC26	P50087	233 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	CLD1	P53264	445 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	PRP38	Q00723	242 aa	Predicted RBP	4.89	□□□□□ -1.63
PAP1	YKR002W	YML018C	Q03730	393 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	ARC18	Q05933	178 aa	Known RBP	4.89	□□□□□ -1.63
PAP1	YKR002W	COQ10	Q08058	207 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	URB1	P34241	1764 aa	Known RBP	4.89	□□□□□ -1.63
PAP1	YKR002W	YAL064W-B	O13512	126 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	YGL041W-A	P0C5N3	154 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	RPL35A	P0CX84	120 aa	Known RBP	4.89	□□□□□ -1.63
PAP1	YKR002W	RPL35B	P0CX85	120 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 79.6 ms