RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W Q0142Q9ZZW4 58 aa3.19□□□□□ -1.9
NSP1YJL041W PAI3P01094 68 aa3.19□□□□□ -1.9
NSP1YJL041W AMD1P15274 810 aaKnown RBP3.19□□□□□ -1.9
NSP1YJL041W ERD2P18414 219 aa3.19□□□□□ -1.9
NSP1YJL041W ACO1P19414 778 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
NSP1YJL041W YCR061WP25639 631 aa3.19□□□□□ -1.9
NSP1YJL041W SFK1P35735 353 aa3.19□□□□□ -1.9
NSP1YJL041W SRY1P36007 326 aa3.19□□□□□ -1.9
NSP1YJL041W YKR073CP36153 106 aa3.19□□□□□ -1.9
NSP1YJL041W MRPL28P36527 147 aa3.19□□□□□ -1.9
NSP1YJL041W KTR3P38130 404 aaPredicted RBP3.19□□□□□ -1.9
NSP1YJL041W ROT2P38138 954 aa3.19□□□□□ -1.9
NSP1YJL041W NTC20P38302 140 aaPredicted RBP3.19□□□□□ -1.9
NSP1YJL041W URA8P38627 578 aaPredicted RBP3.19□□□□□ -1.9
NSP1YJL041W DOG1P38774 246 aa3.19□□□□□ -1.9
NSP1YJL041W IRC22P40006 225 aa3.19□□□□□ -1.9
NSP1YJL041W FLX1P40464 311 aa3.19□□□□□ -1.9
NSP1YJL041W NIT2P47016 307 aa3.19□□□□□ -1.9
NSP1YJL041W BNA2P47125 453 aa3.19□□□□□ -1.9
NSP1YJL041W HXT16P47185 567 aa3.19□□□□□ -1.9
NSP1YJL041W YGR126WP53274 230 aa3.19□□□□□ -1.9
NSP1YJL041W YMR166CQ03829 368 aa3.19□□□□□ -1.9
NSP1YJL041W RAV2Q03956 351 aa3.19□□□□□ -1.9
NSP1YJL041W BLS1Q06071 122 aa3.19□□□□□ -1.9
NSP1YJL041W XYL2Q07993 356 aa3.19□□□□□ -1.9
NSP1YJL041W AAD15Q08361 143 aa3.19□□□□□ -1.9
NSP1YJL041W YLL056CQ12177 298 aa3.19□□□□□ -1.9
NSP1YJL041W SIR2P06700 562 aa3.18□□□□□ -1.9
NSP1YJL041W GDH1P07262 454 aaKnown RBP3.18□□□□□ -1.9
NSP1YJL041W PEP4P07267 405 aaKnown RBP3.18□□□□□ -1.9
NSP1YJL041W DFR1P07807 211 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
NSP1YJL041W ATG15P25641 520 aa3.18□□□□□ -1.9
NSP1YJL041W TMT1P32643 299 aa3.18□□□□□ -1.9
NSP1YJL041W YKU70P32807 602 aa3.18□□□□□ -1.9
NSP1YJL041W SER1P33330 395 aaKnown RBP3.18□□□□□ -1.9
NSP1YJL041W TUL1P36096 758 aa3.18□□□□□ -1.9
NSP1YJL041W RTC2P38279 296 aa3.18□□□□□ -1.9
NSP1YJL041W UME6P39001 836 aa3.18□□□□□ -1.9
NSP1YJL041W FAU1P40099 211 aa3.18□□□□□ -1.9
NSP1YJL041W SEC24P40482 926 aaKnown RBP3.18□□□□□ -1.9
NSP1YJL041W LYS12P40495 371 aaKnown RBP3.18□□□□□ -1.9
NSP1YJL041W SCS3P53012 380 aa3.18□□□□□ -1.9
NSP1YJL041W BIO4P53630 237 aa3.18□□□□□ -1.9
NSP1YJL041W YNR066CP53752 436 aa3.18□□□□□ -1.9
NSP1YJL041W ATG4P53867 494 aa3.18□□□□□ -1.9
NSP1YJL041W SMX3P54999 86 aaPredicted RBP3.18□□□□□ -1.9
NSP1YJL041W YMR155WQ03795 547 aa3.18□□□□□ -1.9
NSP1YJL041W YMR160WQ03823 816 aa3.18□□□□□ -1.9
NSP1YJL041W HPT1Q04178 221 aaKnown RBP3.18□□□□□ -1.9
NSP1YJL041W YDR222WQ04925 415 aa3.18□□□□□ -1.9
NSP1YJL041W YPR098CQ06089 161 aa3.18□□□□□ -1.9
NSP1YJL041W TPO3Q06451 622 aa3.18□□□□□ -1.9
NSP1YJL041W CTF3Q12748 733 aa3.18□□□□□ -1.9
NSP1YJL041W SUC2P00724 532 aa3.18□□□□□ -1.9
NSP1YJL041W RAD52P06778 471 aaKnown RBP3.18□□□□□ -1.9
NSP1YJL041W ASP3-2P0CX77 362 aa3.18□□□□□ -1.9
NSP1YJL041W ASP3-3P0CX78 362 aa3.18□□□□□ -1.9
NSP1YJL041W ASP3-4P0CX79 362 aa3.18□□□□□ -1.9
NSP1YJL041W ASP3-1P0CZ17 362 aa3.18□□□□□ -1.9
NSP1YJL041W SAG1P20840 650 aa3.18□□□□□ -1.9
NSP1YJL041W CDC20P26309 610 aa3.18□□□□□ -1.9
NSP1YJL041W HOM6P31116 359 aaKnown RBP3.18□□□□□ -1.9
NSP1YJL041W SRP68P38687 599 aaKnown RBP3.18□□□□□ -1.9
NSP1YJL041W YEL057CP39983 233 aa3.18□□□□□ -1.9
NSP1YJL041W SNU13P39990 126 aaKnown RBP3.18□□□□□ -1.9
NSP1YJL041W MIT1P40002 666 aa3.18□□□□□ -1.9
NSP1YJL041W YIL152WP40455 235 aa3.18□□□□□ -1.9
NSP1YJL041W MSL1P40567 111 aaPredicted RBP3.18□□□□□ -1.9
NSP1YJL041W IME4P41833 600 aa3.18□□□□□ -1.9
NSP1YJL041W HMS2P47175 358 aa3.18□□□□□ -1.9
NSP1YJL041W SNO2P53823 222 aa3.18□□□□□ -1.9
NSP1YJL041W IBD2P53892 351 aa3.18□□□□□ -1.9
NSP1YJL041W APJ1P53940 528 aa3.18□□□□□ -1.9
NSP1YJL041W OAZ1Q02803 292 aa3.18□□□□□ -1.9
NSP1YJL041W TMA23Q03525 211 aa3.18□□□□□ -1.9
NSP1YJL041W GOT1Q03554 138 aa3.18□□□□□ -1.9
NSP1YJL041W CTR3Q06686 241 aa3.18□□□□□ -1.9
NSP1YJL041W ENT4Q07872 247 aa3.18□□□□□ -1.9
NSP1YJL041W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
NSP1YJL041W YPR145C-AQ2V2P0 78 aa3.18□□□□□ -1.9
NSP1YJL041W RPL35AP0CX84 120 aaKnown RBP3.17□□□□□ -1.9
NSP1YJL041W RPL35BP0CX85 120 aaKnown RBP3.17□□□□□ -1.9
NSP1YJL041W HYP2P23301 157 aaKnown RBP3.17□□□□□ -1.9
NSP1YJL041W ERG9P29704 444 aa3.17□□□□□ -1.9
NSP1YJL041W ARP2P32381 391 aaKnown RBP3.17□□□□□ -1.9
NSP1YJL041W UTR5P32630 166 aa3.17□□□□□ -1.9
NSP1YJL041W BCS1P32839 456 aa3.17□□□□□ -1.9
NSP1YJL041W SNC2P33328 115 aa3.17□□□□□ -1.9
NSP1YJL041W TCD2P36101 447 aaKnown RBP3.17□□□□□ -1.9
NSP1YJL041W GMH1P36125 273 aa3.17□□□□□ -1.9
NSP1YJL041W YBR053CP38235 358 aa3.17□□□□□ -1.9
NSP1YJL041W YHR177WP38867 453 aa3.17□□□□□ -1.9
NSP1YJL041W HMF1P40037 129 aaKnown RBP3.17□□□□□ -1.9
NSP1YJL041W AYR1P40471 297 aa3.17□□□□□ -1.9
NSP1YJL041W YIL054WP40524 105 aa3.17□□□□□ -1.9
NSP1YJL041W SNM1P40993 198 aa3.17□□□□□ -1.9
NSP1YJL041W SYS1P41544 203 aa3.17□□□□□ -1.9
NSP1YJL041W VMA21P41806 77 aa3.17□□□□□ -1.9
NSP1YJL041W YDL186WP48568 277 aa3.17□□□□□ -1.9
NSP1YJL041W CTR1P49573 406 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms