RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C GMC2Q06201 188 aa1.66□□□□□ -2.14
TPM2YIL138C SEC10Q06245 871 aa1.66□□□□□ -2.14
TPM2YIL138C CTR3Q06686 241 aa1.66□□□□□ -2.14
TPM2YIL138C RLP24Q07915 199 aaKnown RBP1.66□□□□□ -2.14
TPM2YIL138C PRR2Q12310 699 aa1.66□□□□□ -2.14
TPM2YIL138C FLO1P32768 1537 aa1.66□□□□□ -2.14
TPM2YIL138C TUS1Q06412 1307 aa1.66□□□□□ -2.14
TPM2YIL138C RPL24AP04449 155 aaKnown RBP1.65□□□□□ -2.15
TPM2YIL138C PEX3P28795 441 aa1.65□□□□□ -2.15
TPM2YIL138C ERG2P32352 222 aa1.65□□□□□ -2.15
TPM2YIL138C RIB7P33312 244 aa1.65□□□□□ -2.15
TPM2YIL138C YKT6P36015 200 aaKnown RBP1.65□□□□□ -2.15
TPM2YIL138C TRM7P38238 310 aaKnown RBP1.65□□□□□ -2.15
TPM2YIL138C HSM3P38348 480 aa1.65□□□□□ -2.15
TPM2YIL138C COA1P40452 197 aa1.65□□□□□ -2.15
TPM2YIL138C YJL144WP47009 104 aa1.65□□□□□ -2.15
TPM2YIL138C TAD2P47058 250 aa1.65□□□□□ -2.15
TPM2YIL138C HSH155P49955 971 aaKnown RBP1.65□□□□□ -2.15
TPM2YIL138C MPP6P53725 186 aaPredicted RBP1.65□□□□□ -2.15
TPM2YIL138C FMP41P53889 259 aaKnown RBP1.65□□□□□ -2.15
TPM2YIL138C ARV1Q06541 321 aa1.65□□□□□ -2.15
TPM2YIL138C ATG5Q12380 294 aa1.65□□□□□ -2.15
TPM2YIL138C YOS9Q99220 542 aa1.65□□□□□ -2.15
TPM2YIL138C YAL064W-BO13512 126 aa1.64□□□□□ -2.15
TPM2YIL138C PHO13P19881 312 aa1.64□□□□□ -2.15
TPM2YIL138C ALK2P32789 676 aaPredicted RBP1.64□□□□□ -2.15
TPM2YIL138C SHC1P39000 512 aa1.64□□□□□ -2.15
TPM2YIL138C YGL088WP53151 121 aa1.64□□□□□ -2.15
TPM2YIL138C LSB1P53281 241 aa1.64□□□□□ -2.15
TPM2YIL138C RTC4P53850 401 aa1.64□□□□□ -2.15
TPM2YIL138C OST6Q03723 332 aa1.64□□□□□ -2.15
TPM2YIL138C HRT1Q08273 121 aa1.64□□□□□ -2.15
TPM2YIL138C FKS1P38631 1876 aaKnown RBP1.64□□□□□ -2.15
TPM2YIL138C RIM15P43565 1770 aa1.64□□□□□ -2.15
TPM2YIL138C DUR1,2P32528 1835 aaKnown RBP1.63□□□□□ -2.15
TPM2YIL138C YEL009C-AA0A023PZF2 135 aa1.63□□□□□ -2.15
TPM2YIL138C HIS1P00498 297 aaKnown RBP1.63□□□□□ -2.15
TPM2YIL138C RPL4AP10664 362 aaKnown RBP1.63□□□□□ -2.15
TPM2YIL138C KRE1P17260 313 aa1.63□□□□□ -2.15
TPM2YIL138C MIG1P27705 504 aa1.63□□□□□ -2.15
TPM2YIL138C ARN2P38724 620 aa1.63□□□□□ -2.15
TPM2YIL138C SUR2P38992 349 aa1.63□□□□□ -2.15
TPM2YIL138C SER33P40510 469 aa1.63□□□□□ -2.15
TPM2YIL138C YJL118WP47022 219 aa1.63□□□□□ -2.15
TPM2YIL138C RPL4BP49626 362 aaKnown RBP1.63□□□□□ -2.15
TPM2YIL138C KAP114P53067 1004 aa1.63□□□□□ -2.15
TPM2YIL138C YNL095CP53932 642 aa1.63□□□□□ -2.15
TPM2YIL138C CDC14Q00684 551 aa1.63□□□□□ -2.15
TPM2YIL138C YPL039WQ03080 316 aa1.63□□□□□ -2.15
TPM2YIL138C SDC1Q03323 175 aa1.63□□□□□ -2.15
TPM2YIL138C COX20Q04935 205 aa1.63□□□□□ -2.15
TPM2YIL138C PEX10Q05568 337 aa1.63□□□□□ -2.15
TPM2YIL138C FUS2Q05670 677 aa1.63□□□□□ -2.15
TPM2YIL138C YOL019WQ08157 551 aa1.63□□□□□ -2.15
TPM2YIL138C FEX1Q08913 375 aa1.63□□□□□ -2.15
TPM2YIL138C FEX2Q08991 375 aa1.63□□□□□ -2.15
TPM2YIL138C TIM22Q12328 207 aa1.63□□□□□ -2.15
TPM2YIL138C MRP1P10662 321 aaKnown RBP1.62□□□□□ -2.15
TPM2YIL138C CSG2P35206 410 aa1.62□□□□□ -2.15
TPM2YIL138C CAB3P36076 571 aa1.62□□□□□ -2.15
TPM2YIL138C YKR032WP36127 104 aa1.62□□□□□ -2.15
TPM2YIL138C SDH4P37298 181 aa1.62□□□□□ -2.15
TPM2YIL138C HMT1P38074 348 aa1.62□□□□□ -2.15
TPM2YIL138C HEK2P38199 381 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
TPM2YIL138C TCD1P38756 429 aa1.62□□□□□ -2.15
TPM2YIL138C YHI9P38765 294 aa1.62□□□□□ -2.15
TPM2YIL138C YER084WP40057 128 aa1.62□□□□□ -2.15
TPM2YIL138C YJR012CP47087 207 aa1.62□□□□□ -2.15
TPM2YIL138C EAF6P47128 113 aa1.62□□□□□ -2.15
TPM2YIL138C YMR166CQ03829 368 aa1.62□□□□□ -2.15
TPM2YIL138C LOA1Q06508 300 aa1.62□□□□□ -2.15
TPM2YIL138C ISD11Q6Q560 94 aa1.62□□□□□ -2.15
TPM2YIL138C AI5_BETAQ9ZZX0 354 aa1.62□□□□□ -2.15
TPM2YIL138C ZWF1P11412 505 aaKnown RBP1.61□□□□□ -2.15
TPM2YIL138C RRT12P25381 491 aa1.61□□□□□ -2.15
TPM2YIL138C RSA4P25382 515 aaKnown RBP1.61□□□□□ -2.15
TPM2YIL138C YET1P35723 206 aa1.61□□□□□ -2.15
TPM2YIL138C PET100P38958 111 aa1.61□□□□□ -2.15
TPM2YIL138C NPT1P39683 429 aaKnown RBP1.61□□□□□ -2.15
TPM2YIL138C DDI1P40087 428 aa1.61□□□□□ -2.15
TPM2YIL138C SCC4P40090 624 aa1.61□□□□□ -2.15
TPM2YIL138C YER188WP40103 239 aa1.61□□□□□ -2.15
TPM2YIL138C NIF3P53081 288 aa1.61□□□□□ -2.15
TPM2YIL138C SLX9P53251 210 aaPredicted RBP1.61□□□□□ -2.15
TPM2YIL138C SYF2P53277 215 aaPredicted RBP1.61□□□□□ -2.15
TPM2YIL138C MAL13P53338 473 aa1.61□□□□□ -2.15
TPM2YIL138C MNT4P53745 580 aa1.61□□□□□ -2.15
TPM2YIL138C EBS1Q03466 884 aaKnown RBP1.61□□□□□ -2.15
TPM2YIL138C MIX17Q03667 156 aa1.61□□□□□ -2.15
TPM2YIL138C ADH6Q04894 360 aaKnown RBP1.61□□□□□ -2.15
TPM2YIL138C CLP1Q08685 445 aaPredicted RBP1.61□□□□□ -2.15
TPM2YIL138C BTS1Q12051 335 aa1.61□□□□□ -2.15
TPM2YIL138C YOL107WQ12239 342 aa1.61□□□□□ -2.15
TPM2YIL138C RRP36Q12481 300 aaPredicted RBP1.61□□□□□ -2.15
TPM2YIL138C FAS2P19097 1887 aaKnown RBP1.6□□□□□ -2.15
TPM2YIL138C TDH2P00358 332 aaKnown RBP1.6□□□□□ -2.15
TPM2YIL138C COX2P00410 251 aa1.6□□□□□ -2.15
TPM2YIL138C HIS3P06633 220 aa1.6□□□□□ -2.15
TPM2YIL138C UTR5P32630 166 aa1.6□□□□□ -2.15
TPM2YIL138C PHO88P38264 188 aaPredicted RBP1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms