RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C MHR1Q06630 226 aa3.56□□□□□ -1.84
RPB7YDR404C TMC1Q08422 150 aaPredicted RBP3.56□□□□□ -1.84
RPB7YDR404C EMP46Q12396 444 aa3.56□□□□□ -1.84
RPB7YDR404C YBL111CQ3E7Y5 667 aa3.56□□□□□ -1.84
RPB7YDR404C JIP3O13555 125 aa3.55□□□□□ -1.84
RPB7YDR404C IFM1P25038 676 aa3.55□□□□□ -1.84
RPB7YDR404C YKL187CP34231 750 aa3.55□□□□□ -1.84
RPB7YDR404C SMP1P38128 452 aa3.55□□□□□ -1.84
RPB7YDR404C EDC3P39998 551 aaKnown RBP3.55□□□□□ -1.84
RPB7YDR404C OST6Q03723 332 aa3.55□□□□□ -1.84
RPB7YDR404C GRX3Q03835 250 aa3.55□□□□□ -1.84
RPB7YDR404C DPP1Q05521 289 aa3.55□□□□□ -1.84
RPB7YDR404C FOL3Q12676 427 aaPredicted RBP3.55□□□□□ -1.84
RPB7YDR404C MDN1Q12019 4910 aaKnown RBP3.54□□□□□ -1.84
RPB7YDR404C YKR104WP0CE69 306 aa3.54□□□□□ -1.84
RPB7YDR404C POF1P25576 258 aa3.54□□□□□ -1.84
RPB7YDR404C ARO4P32449 370 aaKnown RBP3.54□□□□□ -1.84
RPB7YDR404C TAF14P35189 244 aa3.54□□□□□ -1.84
RPB7YDR404C CSG2P35206 410 aa3.54□□□□□ -1.84
RPB7YDR404C GPX1P36014 167 aa3.54□□□□□ -1.84
RPB7YDR404C MRPL27P36526 146 aaPredicted RBP3.54□□□□□ -1.84
RPB7YDR404C SDS24P38314 527 aa3.54□□□□□ -1.84
RPB7YDR404C HSM3P38348 480 aa3.54□□□□□ -1.84
RPB7YDR404C EFM1P38732 585 aa3.54□□□□□ -1.84
RPB7YDR404C GGC1P38988 300 aa3.54□□□□□ -1.84
RPB7YDR404C YER189WP40104 122 aa3.54□□□□□ -1.84
RPB7YDR404C PRE5P40302 234 aaKnown RBP3.54□□□□□ -1.84
RPB7YDR404C HIT1P46973 164 aa3.54□□□□□ -1.84
RPB7YDR404C YLR152CP54072 576 aa3.54□□□□□ -1.84
RPB7YDR404C MRPS16Q02608 121 aa3.54□□□□□ -1.84
RPB7YDR404C API2Q04413 109 aa3.54□□□□□ -1.84
RPB7YDR404C BOP2Q06150 570 aa3.54□□□□□ -1.84
RPB7YDR404C ARV1Q06541 321 aa3.54□□□□□ -1.84
RPB7YDR404C YOR292CQ08743 309 aa3.54□□□□□ -1.84
RPB7YDR404C YDR018CQ12185 396 aa3.54□□□□□ -1.84
RPB7YDR404C YOR114WQ12219 294 aa3.54□□□□□ -1.84
RPB7YDR404C CDC39P25655 2108 aaKnown RBP3.53□□□□□ -1.84
RPB7YDR404C HIS1P00498 297 aaKnown RBP3.53□□□□□ -1.84
RPB7YDR404C ATG15P25641 520 aa3.53□□□□□ -1.84
RPB7YDR404C TIP20P33891 701 aa3.53□□□□□ -1.84
RPB7YDR404C BIG1P38813 335 aa3.53□□□□□ -1.84
RPB7YDR404C TAD2P47058 250 aa3.53□□□□□ -1.84
RPB7YDR404C YPS5P53057 165 aa3.53□□□□□ -1.84
RPB7YDR404C TPN1P53099 579 aa3.53□□□□□ -1.84
RPB7YDR404C PEX31P53203 462 aa3.53□□□□□ -1.84
RPB7YDR404C TIM21P53220 239 aa3.53□□□□□ -1.84
RPB7YDR404C FMP48P53233 369 aa3.53□□□□□ -1.84
RPB7YDR404C SRL4Q03085 281 aa3.53□□□□□ -1.84
RPB7YDR404C ADH6Q04894 360 aaKnown RBP3.53□□□□□ -1.84
RPB7YDR404C YPR114WQ06107 315 aa3.53□□□□□ -1.84
RPB7YDR404C VPS68Q12016 184 aa3.53□□□□□ -1.84
RPB7YDR404C YOR029WQ12243 111 aa3.53□□□□□ -1.84
RPB7YDR404C MRP1P10662 321 aaKnown RBP3.52□□□□□ -1.85
RPB7YDR404C SCL1P21243 252 aaKnown RBP3.52□□□□□ -1.85
RPB7YDR404C EPT1P22140 391 aa3.52□□□□□ -1.85
RPB7YDR404C PCL1P24867 279 aa3.52□□□□□ -1.85
RPB7YDR404C SPS19P32573 292 aaKnown RBP3.52□□□□□ -1.85
RPB7YDR404C CDC13P32797 924 aaKnown RBP3.52□□□□□ -1.85
RPB7YDR404C PRS4P38063 326 aaPredicted RBP3.52□□□□□ -1.85
RPB7YDR404C RFT1P38206 574 aaPredicted RBP3.52□□□□□ -1.85
RPB7YDR404C NPT1P39683 429 aaKnown RBP3.52□□□□□ -1.85
RPB7YDR404C YGL262WP53054 175 aa3.52□□□□□ -1.85
RPB7YDR404C PET117Q02771 107 aa3.52□□□□□ -1.85
RPB7YDR404C INP1Q03694 420 aa3.52□□□□□ -1.85
RPB7YDR404C SFH1Q06168 426 aa3.52□□□□□ -1.85
RPB7YDR404C SDO1Q07953 250 aaKnown RBP3.52□□□□□ -1.85
RPB7YDR404C VIK1Q12045 647 aa3.52□□□□□ -1.85
RPB7YDR404C YPL150WQ12152 901 aa3.52□□□□□ -1.85
RPB7YDR404C ATG31Q12421 196 aa3.52□□□□□ -1.85
RPB7YDR404C RAX2Q12465 1220 aa3.52□□□□□ -1.85
RPB7YDR404C RPS3P05750 240 aaKnown RBP3.51□□□□□ -1.85
RPB7YDR404C BCY1P07278 416 aaKnown RBP3.51□□□□□ -1.85
RPB7YDR404C AEP1P32493 518 aa3.51□□□□□ -1.85
RPB7YDR404C YOX1P34161 385 aa3.51□□□□□ -1.85
RPB7YDR404C DED81P38707 554 aaKnown RBP3.51□□□□□ -1.85
RPB7YDR404C DDI1P40087 428 aa3.51□□□□□ -1.85
RPB7YDR404C FMC1P40491 155 aa3.51□□□□□ -1.85
RPB7YDR404C IBA57P47158 497 aa3.51□□□□□ -1.85
RPB7YDR404C HAL1Q01766 294 aa3.51□□□□□ -1.85
RPB7YDR404C YMR244WQ04018 355 aa3.51□□□□□ -1.85
RPB7YDR404C TSA2Q04120 196 aa3.51□□□□□ -1.85
RPB7YDR404C SEC13Q04491 297 aaKnown RBP3.51□□□□□ -1.85
RPB7YDR404C RUD3Q12234 484 aaKnown RBP3.51□□□□□ -1.85
RPB7YDR404C FAS1P07149 2051 aaKnown RBP3.51□□□□□ -1.85
RPB7YDR404C PET494P07390 489 aaPredicted RBP3.5□□□□□ -1.85
RPB7YDR404C HSP26P15992 214 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
RPB7YDR404C BMH1P29311 267 aaKnown RBP3.5□□□□□ -1.85
RPB7YDR404C SUA5P32579 426 aa3.5□□□□□ -1.85
RPB7YDR404C MBA1P38300 278 aa3.5□□□□□ -1.85
RPB7YDR404C RRT13P40042 185 aa3.5□□□□□ -1.85
RPB7YDR404C TRM9P49957 279 aa3.5□□□□□ -1.85
RPB7YDR404C MNT4P53745 580 aa3.5□□□□□ -1.85
RPB7YDR404C YML018CQ03730 393 aa3.5□□□□□ -1.85
RPB7YDR404C EMI1Q04406 187 aa3.5□□□□□ -1.85
RPB7YDR404C CTR3Q06686 241 aa3.5□□□□□ -1.85
RPB7YDR404C PLB3Q08108 686 aa3.5□□□□□ -1.85
RPB7YDR404C YOL029CQ08187 201 aa3.5□□□□□ -1.85
RPB7YDR404C YCR025CP25352 136 aa3.49□□□□□ -1.85
RPB7YDR404C FRM2P37261 193 aa3.49□□□□□ -1.85
RPB7YDR404C RRG9P40156 214 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms