RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeastyeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB1YDR311W DRE2P36152 348 aa2.21□□□□□ -2.06
TFB1YDR311W RRT13P40042 185 aa2.21□□□□□ -2.06
TFB1YDR311W YIL001WP40560 513 aa2.21□□□□□ -2.06
TFB1YDR311W YPI1P43587 155 aa2.21□□□□□ -2.06
TFB1YDR311W MCM22P47167 239 aa2.21□□□□□ -2.06
TFB1YDR311W YGL039WP53183 348 aaKnown RBP2.21□□□□□ -2.06
TFB1YDR311W AAH1P53909 347 aa2.21□□□□□ -2.06
TFB1YDR311W IMP4P53941 290 aaKnown RBP2.21□□□□□ -2.06
TFB1YDR311W MSA1Q08471 629 aa2.21□□□□□ -2.06
TFB1YDR311W GPM2Q12008 311 aa2.21□□□□□ -2.06
TFB1YDR311W TIR4Q12218 487 aaPredicted RBP2.21□□□□□ -2.06
TFB1YDR311W TPO4Q12256 659 aa2.21□□□□□ -2.06
TFB1YDR311W YOL085CQ99345 113 aa2.21□□□□□ -2.06
TFB1YDR311W PSK1P31374 1356 aa2.21□□□□□ -2.06
TFB1YDR311W MRPL27P36526 146 aaPredicted RBP2.21□□□□□ -2.06
TFB1YDR311W GPI18P38211 433 aa2.21□□□□□ -2.06
TFB1YDR311W YHB1P39676 399 aaKnown RBP2.21□□□□□ -2.06
TFB1YDR311W SEC72P39742 193 aaKnown RBP2.21□□□□□ -2.06
TFB1YDR311W NSA1P53136 463 aaPredicted RBP2.21□□□□□ -2.06
TFB1YDR311W SYF2P53277 215 aaPredicted RBP2.21□□□□□ -2.06
TFB1YDR311W YOR186WQ08560 144 aa2.21□□□□□ -2.06
TFB1YDR311W DFM1Q12743 341 aaKnown RBP2.21□□□□□ -2.06
TFB1YDR311W COX5AP00424 153 aa2.2□□□□□ -2.06
TFB1YDR311W KSS1P14681 368 aa2.2□□□□□ -2.06
TFB1YDR311W URA6P15700 204 aa2.2□□□□□ -2.06
TFB1YDR311W DBF2P22204 572 aa2.2□□□□□ -2.06
TFB1YDR311W DPB2P24482 689 aaPredicted RBP2.2□□□□□ -2.06
TFB1YDR311W SPS18P32572 300 aa2.2□□□□□ -2.06
TFB1YDR311W CSG2P35206 410 aa2.2□□□□□ -2.06
TFB1YDR311W YBL081WP38180 368 aaKnown RBP2.2□□□□□ -2.06
TFB1YDR311W PHO89P38361 574 aa2.2□□□□□ -2.06
TFB1YDR311W ARN2P38724 620 aa2.2□□□□□ -2.06
TFB1YDR311W IRC18P47056 224 aa2.2□□□□□ -2.06
TFB1YDR311W OST3P48439 350 aa2.2□□□□□ -2.06
TFB1YDR311W YGL118CP53132 145 aa2.2□□□□□ -2.06
TFB1YDR311W MRH4P53166 561 aa2.2□□□□□ -2.06
TFB1YDR311W FYV6P53913 173 aa2.2□□□□□ -2.06
TFB1YDR311W YNL046WP53956 172 aa2.2□□□□□ -2.06
TFB1YDR311W DXO1Q06349 442 aa2.2□□□□□ -2.06
TFB1YDR311W YDL144CQ07589 356 aa2.2□□□□□ -2.06
TFB1YDR311W RRP40Q08285 240 aaKnown RBP2.2□□□□□ -2.06
TFB1YDR311W ATG5Q12380 294 aa2.2□□□□□ -2.06
TFB1YDR311W FLO11P08640 1367 aa2.2□□□□□ -2.06
TFB1YDR311W RPL35AP0CX84 120 aaKnown RBP2.19□□□□□ -2.06
TFB1YDR311W RPL35BP0CX85 120 aaKnown RBP2.19□□□□□ -2.06
TFB1YDR311W DBP7P36120 742 aaKnown RBP2.19□□□□□ -2.06
TFB1YDR311W MRPL39P36533 70 aa2.19□□□□□ -2.06
TFB1YDR311W YCR087C-AP37263 153 aa2.19□□□□□ -2.06
TFB1YDR311W EGD2P38879 174 aaKnown RBP2.19□□□□□ -2.06
TFB1YDR311W FRT2P39734 528 aa2.19□□□□□ -2.06
TFB1YDR311W EDC2P40023 145 aaPredicted RBP2.19□□□□□ -2.06
TFB1YDR311W YMR144WP40214 342 aaKnown RBP2.19□□□□□ -2.06
TFB1YDR311W BRR6P53062 197 aa2.19□□□□□ -2.06
TFB1YDR311W SWT21P53873 357 aaPredicted RBP2.19□□□□□ -2.06
TFB1YDR311W MRPS16Q02608 121 aa2.19□□□□□ -2.06
TFB1YDR311W YPL039WQ03080 316 aa2.19□□□□□ -2.06
TFB1YDR311W YPR011CQ12251 326 aa2.19□□□□□ -2.06
TFB1YDR311W MRX4Q12467 430 aa2.19□□□□□ -2.06
TFB1YDR311W CMC2Q3E7A4 109 aa2.19□□□□□ -2.06
TFB1YDR311W YHR139C-AO13536 103 aa2.19□□□□□ -2.06
TFB1YDR311W ERD2P18414 219 aa2.19□□□□□ -2.06
TFB1YDR311W COX10P21592 462 aa2.19□□□□□ -2.06
TFB1YDR311W EPT1P22140 391 aa2.19□□□□□ -2.06
TFB1YDR311W GRE3P38715 327 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
TFB1YDR311W AVT6P40074 448 aa2.19□□□□□ -2.06
TFB1YDR311W YGR018CP53211 109 aa2.19□□□□□ -2.06
TFB1YDR311W SLX9P53251 210 aaPredicted RBP2.19□□□□□ -2.06
TFB1YDR311W YTH1Q06102 208 aaPredicted RBP2.19□□□□□ -2.06
TFB1YDR311W YBL008W-AQ3E821 79 aa2.19□□□□□ -2.06
TFB1YDR311W SWI1P09547 1314 aa2.18□□□□□ -2.06
TFB1YDR311W CDC28P00546 298 aaKnown RBP2.18□□□□□ -2.06
TFB1YDR311W YOL163WP0CF20 169 aa2.18□□□□□ -2.06
TFB1YDR311W ERG2P32352 222 aa2.18□□□□□ -2.06
TFB1YDR311W AST1P35183 429 aa2.18□□□□□ -2.06
TFB1YDR311W SYS1P41544 203 aa2.18□□□□□ -2.06
TFB1YDR311W YGL262WP53054 175 aa2.18□□□□□ -2.06
TFB1YDR311W PDR17P53844 350 aa2.18□□□□□ -2.06
TFB1YDR311W SYC1Q08553 188 aaPredicted RBP2.18□□□□□ -2.06
TFB1YDR311W YPL150WQ12152 901 aa2.18□□□□□ -2.06
TFB1YDR311W YPS3Q12303 508 aa2.18□□□□□ -2.06
TFB1YDR311W YBL112CQ3E7Y4 105 aa2.18□□□□□ -2.06
TFB1YDR311W ADH1P00330 348 aaKnown RBP2.17□□□□□ -2.06
TFB1YDR311W MET2P08465 486 aa2.17□□□□□ -2.06
TFB1YDR311W OAC1P32332 324 aa2.17□□□□□ -2.06
TFB1YDR311W TRM5P38793 499 aa2.17□□□□□ -2.06
TFB1YDR311W ASP1P38986 381 aaPredicted RBP2.17□□□□□ -2.06
TFB1YDR311W COG3P40094 801 aa2.17□□□□□ -2.06
TFB1YDR311W EFM5P53200 248 aaKnown RBP2.17□□□□□ -2.06
TFB1YDR311W YIP3P53633 176 aa2.17□□□□□ -2.06
TFB1YDR311W EMI1Q04406 187 aa2.17□□□□□ -2.06
TFB1YDR311W YML096WQ04489 525 aa2.17□□□□□ -2.06
TFB1YDR311W TMC1Q08422 150 aaPredicted RBP2.17□□□□□ -2.06
TFB1YDR311W FBA1P14540 359 aaKnown RBP2.17□□□□□ -2.06
TFB1YDR311W SNF6P18888 332 aa2.17□□□□□ -2.06
TFB1YDR311W PEX17P40155 199 aa2.17□□□□□ -2.06
TFB1YDR311W YIL054WP40524 105 aa2.17□□□□□ -2.06
TFB1YDR311W MIC19P43594 170 aa2.17□□□□□ -2.06
TFB1YDR311W BXI1P48558 297 aa2.17□□□□□ -2.06
TFB1YDR311W UFD1P53044 361 aa2.17□□□□□ -2.06
TFB1YDR311W MMS2P53152 137 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms