RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C IDP2P41939 412 aa5.57□□□□□ -1.52
VPS61YDR136C LSB3P43603 459 aaKnown RBP5.57□□□□□ -1.52
VPS61YDR136C NIT3P49954 291 aa5.57□□□□□ -1.52
VPS61YDR136C YNR061CP53747 219 aa5.57□□□□□ -1.52
VPS61YDR136C APJ1P53940 528 aa5.57□□□□□ -1.52
VPS61YDR136C SAM50P53969 484 aa5.57□□□□□ -1.52
VPS61YDR136C PET191Q02772 108 aa5.57□□□□□ -1.52
VPS61YDR136C SNO1Q03144 224 aa5.57□□□□□ -1.52
VPS61YDR136C YMR279CQ03263 540 aa5.57□□□□□ -1.52
VPS61YDR136C EKI1Q03764 534 aa5.57□□□□□ -1.52
VPS61YDR136C CAB5Q03941 241 aa5.57□□□□□ -1.52
VPS61YDR136C BSC6Q08280 497 aa5.57□□□□□ -1.52
VPS61YDR136C PRS5Q12265 496 aaKnown RBP5.57□□□□□ -1.52
VPS61YDR136C TY1A-LR4P0C2I8 440 aaKnown RBP5.56□□□□□ -1.52
VPS61YDR136C TY1A-DR6P0CX70 440 aa5.56□□□□□ -1.52
VPS61YDR136C TY1A-ER1P0CX71 440 aa5.56□□□□□ -1.52
VPS61YDR136C TY1A-LR2P0CX72 440 aa5.56□□□□□ -1.52
VPS61YDR136C TY1A-PLP0CX73 440 aa5.56□□□□□ -1.52
VPS61YDR136C TY1A-JR1P0CX74 440 aa5.56□□□□□ -1.52
VPS61YDR136C TY1A-LR3P0CX75 440 aa5.56□□□□□ -1.52
VPS61YDR136C TY1A-ML2P0CX76 440 aa5.56□□□□□ -1.52
VPS61YDR136C CPR2P23285 205 aa5.56□□□□□ -1.52
VPS61YDR136C SIP1P32578 815 aa5.56□□□□□ -1.52
VPS61YDR136C YKL097CP34245 136 aa5.56□□□□□ -1.52
VPS61YDR136C SSH1P38353 490 aaKnown RBP5.56□□□□□ -1.52
VPS61YDR136C BAT1P38891 393 aaKnown RBP5.56□□□□□ -1.52
VPS61YDR136C ELO1P39540 310 aa5.56□□□□□ -1.52
VPS61YDR136C DLS1P40366 167 aa5.56□□□□□ -1.52
VPS61YDR136C NSE4P43124 402 aa5.56□□□□□ -1.52
VPS61YDR136C AGX1P43567 385 aa5.56□□□□□ -1.52
VPS61YDR136C SOL1P50278 321 aa5.56□□□□□ -1.52
VPS61YDR136C RMD9P53140 646 aaKnown RBP5.56□□□□□ -1.52
VPS61YDR136C RHO5P53879 331 aaKnown RBP5.56□□□□□ -1.52
VPS61YDR136C MRPL22P53881 309 aa5.56□□□□□ -1.52
VPS61YDR136C YCL001W-AP87012 153 aa5.56□□□□□ -1.52
VPS61YDR136C YML018CQ03730 393 aa5.56□□□□□ -1.52
VPS61YDR136C YDR248CQ03786 193 aa5.56□□□□□ -1.52
VPS61YDR136C BNA7Q04066 261 aa5.56□□□□□ -1.52
VPS61YDR136C LRS4Q04087 347 aaKnown RBP5.56□□□□□ -1.52
VPS61YDR136C FIT1Q04433 528 aa5.56□□□□□ -1.52
VPS61YDR136C RRT7Q07829 113 aa5.56□□□□□ -1.52
VPS61YDR136C YOL073CQ08232 322 aa5.56□□□□□ -1.52
VPS61YDR136C FCF2Q12035 217 aaPredicted RBP5.56□□□□□ -1.52
VPS61YDR136C TY1A-GR1Q12085 440 aa5.56□□□□□ -1.52
VPS61YDR136C MCT1Q12283 360 aa5.56□□□□□ -1.52
VPS61YDR136C YDR262WQ12331 272 aa5.56□□□□□ -1.52
VPS61YDR136C YPR145C-AQ2V2P0 78 aa5.56□□□□□ -1.52
VPS61YDR136C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.56□□□□□ -1.52
VPS61YDR136C TY1A-OLQ92392 440 aaKnown RBP5.56□□□□□ -1.52
VPS61YDR136C SGA1P08019 549 aa5.55□□□□□ -1.52
VPS61YDR136C CTA1P15202 515 aa5.55□□□□□ -1.52
VPS61YDR136C STE18P18852 110 aa5.55□□□□□ -1.52
VPS61YDR136C BET2P20133 325 aa5.55□□□□□ -1.52
VPS61YDR136C STP22P25604 385 aa5.55□□□□□ -1.52
VPS61YDR136C PPA2P28239 310 aa5.55□□□□□ -1.52
VPS61YDR136C VMA5P31412 392 aaKnown RBP5.55□□□□□ -1.52
VPS61YDR136C ARO4P32449 370 aaKnown RBP5.55□□□□□ -1.52
VPS61YDR136C COS9P36034 407 aa5.55□□□□□ -1.52
VPS61YDR136C ATP3P38077 311 aaKnown RBP5.55□□□□□ -1.52
VPS61YDR136C YHR180WP38868 163 aa5.55□□□□□ -1.52
VPS61YDR136C RPS26AP39938 119 aaKnown RBP5.55□□□□□ -1.52
VPS61YDR136C RPS26BP39939 119 aaKnown RBP5.55□□□□□ -1.52
VPS61YDR136C SLZ1P40167 298 aa5.55□□□□□ -1.52
VPS61YDR136C OYE3P41816 400 aaPredicted RBP5.55□□□□□ -1.52
VPS61YDR136C ERJ5P43613 295 aaPredicted RBP5.55□□□□□ -1.52
VPS61YDR136C LSM8P47093 109 aaKnown RBP5.55□□□□□ -1.52
VPS61YDR136C YJR141WP47172 347 aaPredicted RBP5.55□□□□□ -1.52
VPS61YDR136C CGR1P53188 120 aa5.55□□□□□ -1.52
VPS61YDR136C YGR066CP53242 292 aa5.55□□□□□ -1.52
VPS61YDR136C MDM30Q05930 598 aa5.55□□□□□ -1.52
VPS61YDR136C SCP1Q08873 200 aa5.55□□□□□ -1.52
VPS61YDR136C SRL2Q12020 392 aa5.55□□□□□ -1.52
VPS61YDR136C YDR215CQ12240 137 aa5.55□□□□□ -1.52
VPS61YDR136C YOR343CQ12484 108 aa5.55□□□□□ -1.52
VPS61YDR136C YLR146W-AQ2V2P1 62 aa5.55□□□□□ -1.52
VPS61YDR136C COX19Q3E731 98 aa5.55□□□□□ -1.52
VPS61YDR136C TAO3P40468 2376 aa5.54□□□□□ -1.52
VPS61YDR136C GAL1P04385 528 aa5.54□□□□□ -1.52
VPS61YDR136C PET494P07390 489 aaPredicted RBP5.54□□□□□ -1.52
VPS61YDR136C YSF3P0C074 85 aaPredicted RBP5.54□□□□□ -1.52
VPS61YDR136C YML003WP0CF16 290 aa5.54□□□□□ -1.52
VPS61YDR136C RPL1AP0CX43 217 aaKnown RBP5.54□□□□□ -1.52
VPS61YDR136C RPL1BP0CX44 217 aaKnown RBP5.54□□□□□ -1.52
VPS61YDR136C SED4P25365 1065 aa5.54□□□□□ -1.52
VPS61YDR136C MXR2P25566 168 aa5.54□□□□□ -1.52
VPS61YDR136C IMG2P25642 146 aaPredicted RBP5.54□□□□□ -1.52
VPS61YDR136C ERG3P32353 365 aa5.54□□□□□ -1.52
VPS61YDR136C MTC7P32633 139 aa5.54□□□□□ -1.52
VPS61YDR136C CLB6P32943 380 aa5.54□□□□□ -1.52
VPS61YDR136C ATG8P38182 117 aaRIP-Chip data5.54□□□□□ -1.52not detected
VPS61YDR136C WSC4P38739 605 aa5.54□□□□□ -1.52
VPS61YDR136C YNL208WP40159 199 aaKnown RBP5.54□□□□□ -1.52
VPS61YDR136C RPL13BP40212 199 aaKnown RBP5.54□□□□□ -1.52
VPS61YDR136C TIF34P40217 347 aaKnown RBP5.54□□□□□ -1.52
VPS61YDR136C YFR054CP43622 192 aa5.54□□□□□ -1.52
VPS61YDR136C UFD1P53044 361 aa5.54□□□□□ -1.52
VPS61YDR136C BRR6P53062 197 aa5.54□□□□□ -1.52
VPS61YDR136C MPA43P53583 542 aaPredicted RBP5.54□□□□□ -1.52
VPS61YDR136C AAH1P53909 347 aa5.54□□□□□ -1.52
VPS61YDR136C SWS2P53937 143 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms