RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	SLD7	Q08457	257 aa		4.04	□□□□□ -1.76
RPN5	YDL147W	ISD11	Q6Q560	94 aa		4.04	□□□□□ -1.76
RPN5	YDL147W	NUP157	P40064	1391 aa	Known RBP	4.03	□□□□□ -1.76
RPN5	YDL147W	YOL163W	P0CF20	169 aa		4.03	□□□□□ -1.76
RPN5	YDL147W	BMH1	P29311	267 aa	Known RBP	4.03	□□□□□ -1.76
RPN5	YDL147W	PRP18	P33411	251 aa	Predicted RBP	4.03	□□□□□ -1.76
RPN5	YDL147W	YMR144W	P40214	342 aa	Known RBP	4.03	□□□□□ -1.76
RPN5	YDL147W	RAD17	P48581	401 aa		4.03	□□□□□ -1.76
RPN5	YDL147W	MRH4	P53166	561 aa		4.03	□□□□□ -1.76
RPN5	YDL147W	YPL039W	Q03080	316 aa		4.03	□□□□□ -1.76
RPN5	YDL147W	SYC1	Q08553	188 aa	Predicted RBP	4.03	□□□□□ -1.76
RPN5	YDL147W	COS2	P0CX12	379 aa		4.02	□□□□□ -1.77
RPN5	YDL147W	COS3	P0CX13	379 aa		4.02	□□□□□ -1.77
RPN5	YDL147W	DPB2	P24482	689 aa	Predicted RBP	4.02	□□□□□ -1.77
RPN5	YDL147W	GDH2	P33327	1092 aa	Known RBP	4.02	□□□□□ -1.77
RPN5	YDL147W	AST1	P35183	429 aa		4.02	□□□□□ -1.77
RPN5	YDL147W	CBT1	P36038	271 aa	Predicted RBP	4.02	□□□□□ -1.77
RPN5	YDL147W	YKL075C	P36083	450 aa		4.02	□□□□□ -1.77
RPN5	YDL147W	COS4	P43542	379 aa		4.02	□□□□□ -1.77
RPN5	YDL147W	YFR045W	P43617	309 aa		4.02	□□□□□ -1.77
RPN5	YDL147W	YMR226C	Q05016	267 aa	Known RBP	4.02	□□□□□ -1.77
RPN5	YDL147W	PRR2	Q12310	699 aa		4.02	□□□□□ -1.77
RPN5	YDL147W	TEM1	P38987	245 aa		4.01	□□□□□ -1.77
RPN5	YDL147W	ERG28	P40030	148 aa		4.01	□□□□□ -1.77
RPN5	YDL147W	ECO1	P43605	281 aa		4.01	□□□□□ -1.77
RPN5	YDL147W	CPR7	P47103	393 aa		4.01	□□□□□ -1.77
RPN5	YDL147W	CDC123	Q05791	360 aa		4.01	□□□□□ -1.77
RPN5	YDL147W	PST1	Q12355	444 aa		4.01	□□□□□ -1.77
RPN5	YDL147W	CDC33	P07260	213 aa	Known RBP	4	□□□□□ -1.77
RPN5	YDL147W	RTC3	P38804	111 aa	Predicted RBP	4	□□□□□ -1.77
RPN5	YDL147W	YJL028W	P47062	111 aa		4	□□□□□ -1.77
RPN5	YDL147W	MIC26	P50087	233 aa		4	□□□□□ -1.77
RPN5	YDL147W	ALG9	P53868	555 aa	Known RBP	4	□□□□□ -1.77
RPN5	YDL147W	SEI1	Q06058	285 aa		4	□□□□□ -1.77
RPN5	YDL147W	HEM25	Q07534	307 aa		4	□□□□□ -1.77
RPN5	YDL147W	YOL019W	Q08157	551 aa		4	□□□□□ -1.77
RPN5	YDL147W	YOR186W	Q08560	144 aa		4	□□□□□ -1.77
RPN5	YDL147W	YPR063C	Q12160	140 aa		4	□□□□□ -1.77
RPN5	YDL147W	SMT3	Q12306	101 aa	Known RBP	4	□□□□□ -1.77
RPN5	YDL147W	PAN1	P32521	1480 aa		4	□□□□□ -1.77
RPN5	YDL147W	RPL28	P02406	149 aa	Known RBP	3.99	□□□□□ -1.77
RPN5	YDL147W	URA8	P38627	578 aa	Predicted RBP	3.99	□□□□□ -1.77
RPN5	YDL147W	TRM9	P49957	279 aa		3.99	□□□□□ -1.77
RPN5	YDL147W	MIG2	P53035	382 aa		3.99	□□□□□ -1.77
RPN5	YDL147W	GIM3	P53900	129 aa		3.99	□□□□□ -1.77
RPN5	YDL147W	SSQ1	Q05931	657 aa	Predicted RBP	3.99	□□□□□ -1.77
RPN5	YDL147W	YKL183C-A	Q3E765	70 aa		3.99	□□□□□ -1.77
RPN5	YDL147W	YBL112C	Q3E7Y4	105 aa		3.99	□□□□□ -1.77
RPN5	YDL147W	BCY1	P07278	416 aa	Known RBP	3.98	□□□□□ -1.77
RPN5	YDL147W	SFC1	P33303	322 aa		3.98	□□□□□ -1.77
RPN5	YDL147W	CAB3	P36076	571 aa		3.98	□□□□□ -1.77
RPN5	YDL147W	YNL194C	P40169	301 aa		3.98	□□□□□ -1.77
RPN5	YDL147W	RFC4	P40339	323 aa	Known RBP	3.98	□□□□□ -1.77
RPN5	YDL147W	YIL059C	P40520	121 aa		3.98	□□□□□ -1.77
RPN5	YDL147W	NSA1	P53136	463 aa	Predicted RBP	3.98	□□□□□ -1.77
RPN5	YDL147W	FYV6	P53913	173 aa		3.98	□□□□□ -1.77
RPN5	YDL147W	MRPS17	Q03246	237 aa	Predicted RBP	3.98	□□□□□ -1.77
RPN5	YDL147W	YPR011C	Q12251	326 aa		3.98	□□□□□ -1.77
RPN5	YDL147W	TKL2	P33315	681 aa		3.97	□□□□□ -1.77
RPN5	YDL147W	NTF2	P33331	125 aa	Known RBP	3.97	□□□□□ -1.77
RPN5	YDL147W	BUD13	P46947	266 aa	Predicted RBP	3.97	□□□□□ -1.77
RPN5	YDL147W	MCM22	P47167	239 aa		3.97	□□□□□ -1.77
RPN5	YDL147W	OST3	P48439	350 aa		3.97	□□□□□ -1.77
RPN5	YDL147W	YRA1	Q12159	226 aa	Known RBP	3.97	□□□□□ -1.77
RPN5	YDL147W	SPT3	P06844	337 aa		3.96	□□□□□ -1.77
RPN5	YDL147W	SNA3	P14359	133 aa		3.96	□□□□□ -1.77
RPN5	YDL147W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.77	not detected
RPN5	YDL147W	RNP1	P32385	249 aa		3.96	□□□□□ -1.77
RPN5	YDL147W	GET4	Q12125	312 aa		3.96	□□□□□ -1.77
RPN5	YDL147W	JLP1	Q12358	412 aa		3.96	□□□□□ -1.77
RPN5	YDL147W	DCN1	Q12395	269 aa		3.96	□□□□□ -1.77
RPN5	YDL147W	YER189W	P40104	122 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	ILM1	P47155	203 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	CUS2	P53830	285 aa	Predicted RBP	3.95	□□□□□ -1.78
RPN5	YDL147W	EMI1	Q04406	187 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	YMR114C	Q04471	368 aa	Known RBP	3.95	□□□□□ -1.78
RPN5	YDL147W	YDR222W	Q04925	415 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	ATG38	Q05789	226 aa	Known RBP	3.95	□□□□□ -1.78
RPN5	YDL147W	TIM22	Q12328	207 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	MRX4	Q12467	430 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	SAC3	P46674	1301 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	JIP3	O13555	125 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	PPH21	P23594	369 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	FMT1	P32785	401 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	ECM14	P38836	430 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	NUP57	P48837	541 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	ALG13	P53178	202 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	YGL034C	P53186	121 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	YNL046W	P53956	172 aa		3.95	□□□□□ -1.78
RPN5	YDL147W	SIR4	P11978	1358 aa		3.94	□□□□□ -1.78
RPN5	YDL147W	IPP1	P00817	287 aa	Known RBP	3.94	□□□□□ -1.78
RPN5	YDL147W	ZWF1	P11412	505 aa	Known RBP	3.94	□□□□□ -1.78
RPN5	YDL147W	ECM13	P38195	257 aa		3.94	□□□□□ -1.78
RPN5	YDL147W	SLX1	P38324	304 aa		3.94	□□□□□ -1.78
RPN5	YDL147W	CWC23	P52868	283 aa	Predicted RBP	3.94	□□□□□ -1.78
RPN5	YDL147W	IES4	Q08561	116 aa		3.94	□□□□□ -1.78
RPN5	YDL147W	YPL247C	Q12523	523 aa		3.94	□□□□□ -1.78
RPN5	YDL147W	SWI1	P09547	1314 aa		3.94	□□□□□ -1.78
RPN5	YDL147W	MATALPHA2	P0CY08	210 aa		3.93	□□□□□ -1.78
RPN5	YDL147W	HMLALPHA2	P0CY09	210 aa		3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms