RNA–Protein interactions for RNA: YBR295W

PCA1, Transcript of Cadmium transporting P-type ATPase, yeast

Gene PCA1, Length 3,651 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCA1	YBR295W	SBH2	P52871	88 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	RPS15	Q01855	142 aa	Known RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	THP1	Q08231	455 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	GPM2	Q12008	311 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	RPS4A	P0CX35	261 aa	Known RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	RPS4B	P0CX36	261 aa	Known RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	ANB1	P19211	157 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	BUB2	P26448	306 aa	Predicted RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	UTR2	P32623	467 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	NTF2	P33331	125 aa	Known RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	MAC1	P35192	417 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	IRS4	P36115	615 aa	Known RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	RIB1	P38066	345 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	ARG2	P40360	574 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	VNX1	P42839	908 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	TAH11	P47112	604 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	APS2	Q00381	147 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	RCE1	Q03530	315 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	ANT1	Q06497	328 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	SLM5	P25345	492 aa	Known RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	MRP49	P32388	137 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	GCV3	P39726	170 aa	Predicted RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	MOB2	P43563	287 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	YGL235W	P53071	178 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	BIO5	P53744	561 aa	Known RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	MTQ2	Q03920	221 aa	Predicted RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	PRP11	Q07350	266 aa	Predicted RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	MMT2	Q08970	484 aa		4.26	□□□□□ -1.73
PCA1	YBR295W	ALG6	Q12001	544 aa	Known RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	WTM1	Q12363	437 aa	Known RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	RPL13A	Q12690	199 aa	Predicted RBP	4.26	□□□□□ -1.73
PCA1	YBR295W	PAI3	P01094	68 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	RAS2	P01120	322 aa	Known RBP	4.25	□□□□□ -1.73
PCA1	YBR295W	YPR170W-B	P0C5R9	85 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	MEK1	P24719	497 aa	Predicted RBP	4.25	□□□□□ -1.73
PCA1	YBR295W	YEA6	P39953	335 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	FMP41	P53889	259 aa	Known RBP	4.25	□□□□□ -1.73
PCA1	YBR295W	MRPL1	Q04599	285 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	MCH1	Q07376	486 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	YPL260W	Q08977	551 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	YLL056C	Q12177	298 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	GPM3	Q12326	303 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	DPM1	P14020	267 aa	Known RBP	4.25	□□□□□ -1.73
PCA1	YBR295W	YCK2	P23292	546 aa	Known RBP	4.25	□□□□□ -1.73
PCA1	YBR295W	LSB5	P25369	354 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	MRP17	P28778	131 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	THI2	P38141	450 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	HEM14	P40012	539 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	YML018C	Q03730	393 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	YDR018C	Q12185	396 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	WSC3	Q12215	556 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	YOL159C-A	Q3E769	90 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	TIR1	P10863	254 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
PCA1	YBR295W	FCY2	P17064	533 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	HOM6	P31116	359 aa	Known RBP	4.25	□□□□□ -1.73
PCA1	YBR295W	EMP70	P32802	667 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	PRP18	P33411	251 aa	Predicted RBP	4.25	□□□□□ -1.73
PCA1	YBR295W	ARO9	P38840	513 aa	Predicted RBP	4.25	□□□□□ -1.73
PCA1	YBR295W	YFL052W	P43551	465 aa		4.25	□□□□□ -1.73
PCA1	YBR295W	TPT1	Q12272	230 aa	Known RBP	4.25	□□□□□ -1.73
PCA1	YBR295W	PRE8	P23639	250 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	PUP3	P25451	205 aa	Known RBP	4.24	□□□□□ -1.73
PCA1	YBR295W	YKL151C	P36059	337 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	CAT5	P41735	233 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	YML053C	Q04978	212 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	DIC1	Q06143	298 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	SWM1	Q12379	170 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	ERG6	P25087	383 aa	Known RBP	4.24	□□□□□ -1.73
PCA1	YBR295W	CLB6	P32943	380 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	TKL2	P33315	681 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	SCD5	P34758	872 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	ASK1	P35734	292 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	MRPL24	P36525	258 aa	Predicted RBP	4.24	□□□□□ -1.73
PCA1	YBR295W	YBR241C	P38142	488 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	MET30	P39014	640 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	BMT5	P40493	336 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	GTS1	P40956	396 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	ERJ5	P43613	295 aa	Predicted RBP	4.24	□□□□□ -1.73
PCA1	YBR295W	YGR149W	P48236	432 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	SDT1	P53078	280 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	HUT1	Q12520	339 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	YPL119C-A	Q3E751	87 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	ISD11	Q6Q560	94 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	CUP2	P15315	225 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	SAM2	P19358	384 aa	Known RBP	4.24	□□□□□ -1.73
PCA1	YBR295W	AGP2	P38090	596 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	MSY1	P48527	492 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	BUD9	P53226	547 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	BNA5	Q05979	453 aa		4.24	□□□□□ -1.73
PCA1	YBR295W	VPS63	O13549	108 aa		4.23	□□□□□ -1.73
PCA1	YBR295W	TAH1	P25638	111 aa	Predicted RBP	4.23	□□□□□ -1.73
PCA1	YBR295W	TIP1	P27654	210 aa	Predicted RBP	4.23	□□□□□ -1.73
PCA1	YBR295W	IDH2	P28241	369 aa	Known RBP	4.23	□□□□□ -1.73
PCA1	YBR295W	YEF1	P32622	495 aa		4.23	□□□□□ -1.73
PCA1	YBR295W	MRPS9	P38120	278 aa		4.23	□□□□□ -1.73
PCA1	YBR295W	GAT1	P43574	510 aa		4.23	□□□□□ -1.73
PCA1	YBR295W	SDH7	Q04401	133 aa		4.23	□□□□□ -1.73
PCA1	YBR295W	CYC3	P06182	269 aa		4.23	□□□□□ -1.73
PCA1	YBR295W	SYN8	P31377	255 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 105.8 ms