RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W CYC1P00044 109 aaPredicted RBP5.83□□□□□ -1.48
SWD1YAR003W TDH3P00359 332 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
SWD1YAR003W HEM4P06174 275 aa5.83□□□□□ -1.48
SWD1YAR003W KRE6P32486 720 aa5.83□□□□□ -1.48
SWD1YAR003W SNC2P33328 115 aa5.83□□□□□ -1.48
SWD1YAR003W CLG1P35190 452 aa5.83□□□□□ -1.48
SWD1YAR003W YMR262WP38430 313 aa5.83□□□□□ -1.48
SWD1YAR003W GPP1P41277 250 aaKnown RBP5.83□□□□□ -1.48
SWD1YAR003W ERJ5P43613 295 aaPredicted RBP5.83□□□□□ -1.48
SWD1YAR003W MRH4P53166 561 aa5.83□□□□□ -1.48
SWD1YAR003W POP6P53218 158 aa5.83□□□□□ -1.48
SWD1YAR003W SCW4P53334 386 aaKnown RBP5.83□□□□□ -1.48
SWD1YAR003W YNR048WP53740 393 aa5.83□□□□□ -1.48
SWD1YAR003W RPL6AQ02326 176 aaKnown RBP5.83□□□□□ -1.48
SWD1YAR003W NMA1Q06178 401 aaKnown RBP5.83□□□□□ -1.48
SWD1YAR003W MES1P00958 751 aaKnown RBP5.82□□□□□ -1.48
SWD1YAR003W DSF1P0CX08 502 aa5.82□□□□□ -1.48
SWD1YAR003W YNR073CP0CX09 502 aa5.82□□□□□ -1.48
SWD1YAR003W HXT2P23585 541 aa5.82□□□□□ -1.48
SWD1YAR003W CNE1P27825 502 aa5.82□□□□□ -1.48
SWD1YAR003W PRE4P30657 266 aa5.82□□□□□ -1.48
SWD1YAR003W AFG1P32317 509 aa5.82□□□□□ -1.48
SWD1YAR003W SPT14P32363 452 aa5.82□□□□□ -1.48
SWD1YAR003W ERG24P32462 438 aaKnown RBP5.82□□□□□ -1.48
SWD1YAR003W RIB7P33312 244 aa5.82□□□□□ -1.48
SWD1YAR003W APL3P38065 1025 aa5.82□□□□□ -1.48
SWD1YAR003W MSS4P38994 779 aa5.82□□□□□ -1.48
SWD1YAR003W HPA3P39979 161 aa5.82□□□□□ -1.48
SWD1YAR003W MOB2P43563 287 aa5.82□□□□□ -1.48
SWD1YAR003W MTL1P53214 551 aa5.82□□□□□ -1.48
SWD1YAR003W CRR1Q05790 422 aa5.82□□□□□ -1.48
SWD1YAR003W TPO3Q06451 622 aa5.82□□□□□ -1.48
SWD1YAR003W FRE3Q08905 711 aa5.82□□□□□ -1.48
SWD1YAR003W ATG41Q12048 136 aa5.82□□□□□ -1.48
SWD1YAR003W USB1Q12208 290 aaKnown RBP5.82□□□□□ -1.48
SWD1YAR003W ORT1Q12375 292 aa5.82□□□□□ -1.48
SWD1YAR003W FOL3Q12676 427 aaPredicted RBP5.82□□□□□ -1.48
SWD1YAR003W RPL11AP0C0W9 174 aaKnown RBP5.81□□□□□ -1.48
SWD1YAR003W CUP1-1P0CX80 61 aa5.81□□□□□ -1.48
SWD1YAR003W CUP1-2P0CX81 61 aa5.81□□□□□ -1.48
SWD1YAR003W ERG4P25340 473 aa5.81□□□□□ -1.48
SWD1YAR003W HTD2P38790 280 aaKnown RBP5.81□□□□□ -1.48
SWD1YAR003W PTH1P38876 190 aaKnown RBP5.81□□□□□ -1.48
SWD1YAR003W SYG1P40528 902 aa5.81□□□□□ -1.48
SWD1YAR003W SYS1P41544 203 aa5.81□□□□□ -1.48
SWD1YAR003W CTK2P46962 323 aa5.81□□□□□ -1.48
SWD1YAR003W NIT3P49954 291 aa5.81□□□□□ -1.48
SWD1YAR003W TYW3P53177 273 aa5.81□□□□□ -1.48
SWD1YAR003W YKR005CQ02203 525 aa5.81□□□□□ -1.48
SWD1YAR003W PLP1Q04004 230 aa5.81□□□□□ -1.48
SWD1YAR003W RCN2Q12044 265 aa5.81□□□□□ -1.48
SWD1YAR003W RPL11BQ3E757 174 aaPredicted RBP5.81□□□□□ -1.48
SWD1YAR003W TEL1P38110 2787 aa5.81□□□□□ -1.48
SWD1YAR003W COX5BP00425 151 aa5.8□□□□□ -1.48
SWD1YAR003W SPS4P09937 338 aa5.8□□□□□ -1.48
SWD1YAR003W PET122P10355 254 aa5.8□□□□□ -1.48
SWD1YAR003W RPL30P14120 105 aaKnown RBP5.8□□□□□ -1.48
SWD1YAR003W MAK32P23060 363 aa5.8□□□□□ -1.48
SWD1YAR003W DBF20P32328 564 aa5.8□□□□□ -1.48
SWD1YAR003W HYM1P32464 399 aa5.8□□□□□ -1.48
SWD1YAR003W PPG1P32838 368 aa5.8□□□□□ -1.48
SWD1YAR003W YER084WP40057 128 aa5.8□□□□□ -1.48
SWD1YAR003W UBX6P47049 396 aa5.8□□□□□ -1.48
SWD1YAR003W SIP18P50263 79 aa5.8□□□□□ -1.48
SWD1YAR003W AVT4P50944 713 aa5.8□□□□□ -1.48
SWD1YAR003W YIP4P53093 235 aa5.8□□□□□ -1.48
SWD1YAR003W TPN1P53099 579 aa5.8□□□□□ -1.48
SWD1YAR003W VHT1P53241 593 aa5.8□□□□□ -1.48
SWD1YAR003W LSM7P53905 115 aaKnown RBP5.8□□□□□ -1.48
SWD1YAR003W ACS1Q01574 713 aa5.8□□□□□ -1.48
SWD1YAR003W YLR283WQ05867 314 aa5.8□□□□□ -1.48
SWD1YAR003W MRPL35Q06678 367 aa5.8□□□□□ -1.48
SWD1YAR003W ISA2Q12425 185 aa5.8□□□□□ -1.48
SWD1YAR003W HTZ1Q12692 134 aaKnown RBP5.8□□□□□ -1.48
SWD1YAR003W BLM10P43583 2143 aa5.8□□□□□ -1.48
SWD1YAR003W YLR358CO13565 187 aa5.79□□□□□ -1.48
SWD1YAR003W SGA1P08019 549 aa5.79□□□□□ -1.48
SWD1YAR003W PCL1P24867 279 aa5.79□□□□□ -1.48
SWD1YAR003W YBL010CP32788 280 aa5.79□□□□□ -1.48
SWD1YAR003W MTC6P38849 526 aa5.79□□□□□ -1.48
SWD1YAR003W SEN34P39707 275 aa5.79□□□□□ -1.48
SWD1YAR003W PIG2P40187 538 aa5.79□□□□□ -1.48
SWD1YAR003W AIM25P47140 327 aa5.79□□□□□ -1.48
SWD1YAR003W ARO8P53090 500 aaKnown RBP5.79□□□□□ -1.48
SWD1YAR003W YGL159WP53110 370 aa5.79□□□□□ -1.48
SWD1YAR003W RNH201P53942 307 aa5.79□□□□□ -1.48
SWD1YAR003W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
SWD1YAR003W YML108WQ03759 105 aa5.79□□□□□ -1.48
SWD1YAR003W HNT1Q04344 158 aaKnown RBP5.79□□□□□ -1.48
SWD1YAR003W RFA3P26755 122 aaKnown RBP5.78□□□□□ -1.48
SWD1YAR003W DEG1P31115 442 aaKnown RBP5.78□□□□□ -1.48
SWD1YAR003W MSS1P32559 526 aaPredicted RBP5.78□□□□□ -1.48
SWD1YAR003W CLB6P32943 380 aa5.78□□□□□ -1.48
SWD1YAR003W PPZ2P33329 710 aa5.78□□□□□ -1.48
SWD1YAR003W MRPS5P33759 307 aa5.78□□□□□ -1.48
SWD1YAR003W MCH2P36032 473 aa5.78□□□□□ -1.48
SWD1YAR003W UMP1P38293 148 aa5.78□□□□□ -1.48
SWD1YAR003W ARO9P38840 513 aaPredicted RBP5.78□□□□□ -1.48
SWD1YAR003W AVT7P40501 490 aa5.78□□□□□ -1.48
SWD1YAR003W GPI14P47088 403 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms