RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 PLCG1P19174 1290 aa27.63■■■□□ 2.01
VEGFA-230ENST00000640482 RESTQ13127 1097 aa27.63■■■□□ 2.01
VEGFA-230ENST00000640482 KARSQ15046 597 aaKnown RBP27.63■■■□□ 2.01
VEGFA-230ENST00000640482 GLRA4Q5JXX5 417 aa27.63■■■□□ 2.01
VEGFA-230ENST00000640482 CEP120Q8N960 986 aa27.63■■■□□ 2.01
VEGFA-230ENST00000640482 UROC1Q96N76 676 aa27.63■■■□□ 2.01
VEGFA-230ENST00000640482 TTPALQ9BTX7 342 aa27.63■■■□□ 2.01
VEGFA-230ENST00000640482 CLIC4Q9Y696 253 aa27.63■■■□□ 2.01
VEGFA-230ENST00000640482 TOM1L1O75674 476 aa27.62■■■□□ 2.01
VEGFA-230ENST00000640482 BRD1O95696 1058 aa27.62■■■□□ 2.01
VEGFA-230ENST00000640482 OSTNP61366 133 aa27.62■■■□□ 2.01
VEGFA-230ENST00000640482 ZXDAP98168 799 aa27.62■■■□□ 2.01
VEGFA-230ENST00000640482 CACNB1Q02641 598 aaPredicted RBP27.62■■■□□ 2.01
VEGFA-230ENST00000640482 DHX8Q14562 1220 aaKnown RBP27.62■■■□□ 2.01
VEGFA-230ENST00000640482 C15orf39Q6ZRI6 1047 aa27.62■■■□□ 2.01
VEGFA-230ENST00000640482 CMASQ8NFW8 434 aaPredicted RBP27.62■■■□□ 2.01
VEGFA-230ENST00000640482 HDAC7Q8WUI4 952 aa27.62■■■□□ 2.01
VEGFA-230ENST00000640482 RAD54LQ92698 747 aa27.62■■■□□ 2.01
VEGFA-230ENST00000640482 ACAP3Q96P50 834 aa27.62■■■□□ 2.01
VEGFA-230ENST00000640482 C2CD4DB7Z1M9 353 aa27.61■■■□□ 2.01
VEGFA-230ENST00000640482 PTPAQ15257 358 aa27.61■■■□□ 2.01
VEGFA-230ENST00000640482 FAM171A1Q5VUB5 890 aa27.61■■■□□ 2.01
VEGFA-230ENST00000640482 ZPBP2Q6X784 338 aa27.61■■■□□ 2.01
VEGFA-230ENST00000640482 TDRD5Q8NAT2 981 aaKnown RBP27.61■■■□□ 2.01
VEGFA-230ENST00000640482 REEP2Q9BRK0 252 aa27.61■■■□□ 2.01
VEGFA-230ENST00000640482 CCSER1Q9C0I3 900 aa27.61■■■□□ 2.01
VEGFA-230ENST00000640482 BLOC1S4Q9NUP1 217 aa27.61■■■□□ 2.01
VEGFA-230ENST00000640482 SLC38A7Q9NVC3 462 aa27.61■■■□□ 2.01
VEGFA-230ENST00000640482 ANKFY1Q9P2R3 1169 aa27.61■■■□□ 2.01
VEGFA-230ENST00000640482 USTQ9Y2C2 406 aa27.61■■■□□ 2.01
VEGFA-230ENST00000640482 SMIM28A0A1B0GU29 152 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 TMEM189-UBE2V1I3L0A0 370 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 ABLIM1O14639 778 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 FAM13AO94988 1023 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 KRT18P05783 430 aaKnown RBP27.6■■■□□ 2.01
VEGFA-230ENST00000640482 HARSP12081 509 aaKnown RBP27.6■■■□□ 2.01
VEGFA-230ENST00000640482 SCP2P22307 547 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 NCKAP1LP55160 1127 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 MCM6Q14566 821 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 NOLC1Q14978 699 aaKnown RBP eCLIP27.6■■■□□ 2.01
VEGFA-230ENST00000640482 PTPN21Q16825 1174 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 XKR4Q5GH76 650 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 RTP2Q5QGT7 225 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 PDXDC1Q6P996 788 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 DCLRE1AQ6PJP8 1040 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 ALKAL1Q6UXT8 129 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 CYP26C1Q6V0L0 522 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 CEP57Q86XR8 500 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 PALB2Q86YC2 1186 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 PLEKHA4Q9H4M7 779 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 FOXD4L1Q9NU39 408 aa27.6■■■□□ 2.01
VEGFA-230ENST00000640482 B3GAT3O94766 335 aa27.59■■■□□ 2.01
VEGFA-230ENST00000640482 PRSS55Q6UWB4 352 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-230ENST00000640482 TRIM67Q6ZTA4 783 aa27.59■■■□□ 2.01
VEGFA-230ENST00000640482 CCDC149Q6ZUS6 474 aa27.59■■■□□ 2.01
VEGFA-230ENST00000640482 GLYCTKQ8IVS8 523 aa27.59■■■□□ 2.01
VEGFA-230ENST00000640482 PLCD3Q8N3E9 789 aa27.59■■■□□ 2.01
VEGFA-230ENST00000640482 MYCT1Q8N699 235 aa27.59■■■□□ 2.01
VEGFA-230ENST00000640482 LRRC15Q8TF66 581 aa27.59■■■□□ 2.01
VEGFA-230ENST00000640482 PIK3R5Q8WYR1 880 aa27.59■■■□□ 2.01
VEGFA-230ENST00000640482 LARP4BQ92615 738 aaKnown RBP27.59■■■□□ 2.01
VEGFA-230ENST00000640482 BICD1Q96G01 975 aa27.59■■■□□ 2.01
VEGFA-230ENST00000640482 ZBTB45Q96K62 511 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-230ENST00000640482 SNX27Q96L92 541 aa27.59■■■□□ 2.01
VEGFA-230ENST00000640482 ZSCAN16Q9H4T2 348 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-230ENST00000640482 PARVGQ9HBI0 331 aa27.59■■■□□ 2.01
VEGFA-230ENST00000640482 ARIH1Q9Y4X5 557 aaPredicted RBP27.59■■■□□ 2.01
VEGFA-230ENST00000640482 SRPRBQ9Y5M8 271 aaKnown RBP27.59■■■□□ 2.01
VEGFA-230ENST00000640482 CLDN3O15551 220 aa27.58■■■□□ 2.01
VEGFA-230ENST00000640482 TGM5O43548 720 aa27.58■■■□□ 2.01
VEGFA-230ENST00000640482 RPL17P18621 184 aaKnown RBP27.58■■■□□ 2.01
VEGFA-230ENST00000640482 MARCKSP29966 332 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-230ENST00000640482 CLCNKBP51801 687 aa27.58■■■□□ 2.01
VEGFA-230ENST00000640482 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-230ENST00000640482 HAUS6Q7Z4H7 955 aa27.58■■■□□ 2.01
VEGFA-230ENST00000640482 KCNN1Q92952 543 aa27.58■■■□□ 2.01
VEGFA-230ENST00000640482 ACSF2Q96CM8 615 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-230ENST00000640482 DDX27Q96GQ7 796 aaKnown RBP27.58■■■□□ 2.01
VEGFA-230ENST00000640482 RHOBTB2Q9BYZ6 727 aa27.58■■■□□ 2.01
VEGFA-230ENST00000640482 CCDC39Q9UFE4 941 aa27.58■■■□□ 2.01
VEGFA-230ENST00000640482 FBXO2Q9UK22 296 aaPredicted RBP27.58■■■□□ 2.01
VEGFA-230ENST00000640482 MTMR6Q9Y217 621 aa27.58■■■□□ 2.01
VEGFA-230ENST00000640482 CCDC195A0A1B0GUA6 201 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 TRAPPC3O43617 180 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 STX6O43752 255 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 TBCAO75347 108 aaKnown RBP27.57■■■□□ 2
VEGFA-230ENST00000640482 KCNE1P15382 129 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 DDIT3P35638 169 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 TXLNAP40222 546 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 MATR3P43243 847 aaKnown RBP eCLIP27.57■■■□□ 2
VEGFA-230ENST00000640482 ZNF131P52739 623 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 MCL1Q07820 350 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 PSMD5Q16401 504 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 UPP1Q16831 310 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 FAM173BQ6P4H8 233 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 ZDHHC14Q8IZN3 488 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 EPSTI1Q96J88 318 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 MFSD14AQ96MC6 490 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 GOLGA2P5Q9HBQ8 144 aa27.57■■■□□ 2
VEGFA-230ENST00000640482 CNTN3Q9P232 1028 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms