RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 ADRB2P07550 413 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 EPHA1P21709 976 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 ALDH1B1P30837 517 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 NTF4P34130 210 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 GSTM4Q03013 218 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 SMC1AQ14683 1233 aaKnown RBP8.23□□□□□ -1.09
NECAP1-220ENST00000639841 PPM1JQ5JR12 505 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 PRR5LQ6MZQ0 368 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 CCDC103Q8IW40 242 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 NPLOC4Q8TAT6 608 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 ZC3H10Q96K80 434 aaKnown RBP8.23□□□□□ -1.09
NECAP1-220ENST00000639841 ACAP3Q96P50 834 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 STK33Q9BYT3 514 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 TXLNGYQ9BZA5 131 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 CHMP4BQ9H444 224 aaKnown RBP8.23□□□□□ -1.09
NECAP1-220ENST00000639841 ZMAT3Q9HA38 289 aaKnown RBP8.23□□□□□ -1.09
NECAP1-220ENST00000639841 TOMM22Q9NS69 142 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 ABCF3Q9NUQ8 709 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 DENND2AQ9ULE3 1009 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 LIMCH1Q9UPQ0 1083 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 FHOD1Q9Y613 1164 aa8.23□□□□□ -1.09
NECAP1-220ENST00000639841 IBTKQ9P2D0 1353 aaPredicted RBP8.23□□□□□ -1.09
NECAP1-220ENST00000639841 SYT5O00445 386 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 THBDP07204 575 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 PARP1P09874 1014 aaKnown RBP8.22□□□□□ -1.09
NECAP1-220ENST00000639841 LCP1P13796 627 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 TNP2Q05952 138 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 LRP8Q14114 963 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 ARHGAP44Q17R89 818 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 SLC30A6Q6NXT4 461 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 MFSD6Q6ZSS7 791 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 FAM47EQ6ZV65 393 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 FIBCD1Q8N539 461 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 KLHDC4Q8TBB5 520 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 VWCEQ96DN2 955 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 TRIM11Q96F44 468 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 HIC2Q96JB3 615 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 MCMBPQ9BTE3 642 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 VPS33BQ9H267 617 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 TAF1DQ9H5J8 278 aaPredicted RBP8.22□□□□□ -1.09
NECAP1-220ENST00000639841 GJB4Q9NTQ9 266 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 ARGLU1Q9NWB6 273 aaPredicted RBP8.22□□□□□ -1.09
NECAP1-220ENST00000639841 KIF17Q9P2E2 1029 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 SIK3Q9Y2K2 1263 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 STXBP5LQ9Y2K9 1186 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 SYNRGQ9UMZ2 1314 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 A0A1W2PPC4 97 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 GNAT3A8MTJ3 354 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 H7C1D1 291 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 DTNBO60941 627 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 MYCLP12524 364 aaPredicted RBP8.22□□□□□ -1.09
NECAP1-220ENST00000639841 EIF2AK2P19525 551 aaKnown RBP8.22□□□□□ -1.09
NECAP1-220ENST00000639841 BECN1Q14457 450 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 FSCN1Q16658 493 aaKnown RBP8.22□□□□□ -1.09
NECAP1-220ENST00000639841 TIGD6Q17RP2 521 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 KIF4BQ2VIQ3 1234 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 SYTL5Q8TDW5 730 aaPredicted RBP8.22□□□□□ -1.09
NECAP1-220ENST00000639841 RFFLQ8WZ73 363 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 COPS5Q92905 334 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 CENPTQ96BT3 561 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 TSEN34Q9BSV6 310 aaKnown RBP8.22□□□□□ -1.09
NECAP1-220ENST00000639841 COLEC11Q9BWP8 271 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 EDARQ9UNE0 448 aa8.22□□□□□ -1.09
NECAP1-220ENST00000639841 UTRNP46939 3433 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 RTCAO00442 366 aaKnown RBP8.21□□□□□ -1.09
NECAP1-220ENST00000639841 ARHGAP6O43182 974 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 HTATSF1O43719 755 aaKnown RBP8.21□□□□□ -1.09
NECAP1-220ENST00000639841 BAG2O95816 211 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 MX2P20592 715 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 HOXD13P35453 343 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 CREMQ03060 361 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 MOGSQ13724 837 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 SCARB2Q14108 478 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 DAG1Q14118 895 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 SMAD1Q15797 465 aaKnown RBP8.21□□□□□ -1.09
NECAP1-220ENST00000639841 DPY19L1Q2PZI1 675 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 ZBTB37Q5TC79 503 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 RPUSD3Q6P087 351 aaKnown RBP8.21□□□□□ -1.09
NECAP1-220ENST00000639841 ZNF790Q6PG37 636 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 FRMD7Q6ZUT3 714 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 CEP57L1Q8IYX8 460 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 GPC2Q8N158 579 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 TDRD7Q8NHU6 1098 aaKnown RBP8.21□□□□□ -1.09
NECAP1-220ENST00000639841 CYB5D2Q8WUJ1 264 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 ZDHHC15Q96MV8 337 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 PYM1Q9BRP8 204 aaKnown RBP8.21□□□□□ -1.09
NECAP1-220ENST00000639841 ALG1Q9BT22 464 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 NYXQ9GZU5 481 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 DHX36Q9H2U1 1008 aaKnown RBP8.21□□□□□ -1.09
NECAP1-220ENST00000639841 IPPKQ9H8X2 491 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 ORC3Q9UBD5 711 aaPredicted RBP8.21□□□□□ -1.09
NECAP1-220ENST00000639841 SEL1LQ9UBV2 794 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 NR2E3Q9Y5X4 410 aa8.21□□□□□ -1.09
NECAP1-220ENST00000639841 CDHR2Q9BYE9 1310 aa8.21□□□□□ -1.1
NECAP1-220ENST00000639841 C17orf113A0A1B0GUU1 675 aa8.21□□□□□ -1.1
NECAP1-220ENST00000639841 FOXN1O15353 648 aa8.21□□□□□ -1.1
NECAP1-220ENST00000639841 IL18RAPO95256 599 aa8.21□□□□□ -1.1
NECAP1-220ENST00000639841 APOA4P06727 396 aa8.21□□□□□ -1.1
NECAP1-220ENST00000639841 MAPTP10636 758 aaKnown RBP8.21□□□□□ -1.1
NECAP1-220ENST00000639841 PTX3P26022 381 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms