RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 PYGBP11216 843 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 GFAPP14136 432 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 EIF2AK2P19525 551 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 SIK1P57059 783 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 GIMAP8Q8ND71 665 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 ATXN2LQ8WWM7 1075 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 FAF2Q96CS3 445 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 ZFRQ96KR1 1074 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 DHX36Q9H2U1 1008 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 TOPORSQ9NS56 1045 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 NDFIP2Q9NV92 336 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 DCTN4Q9UJW0 460 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 TMEM120BA0PK00 339 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 ARIH2O95376 493 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 GGPS1O95749 300 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 PTPN4P29074 926 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 HDAC4P56524 1084 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 SNAP25P60880 206 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 HERVK_113P62684 666 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 RAD51Q06609 339 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 STXBP2Q15833 593 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 SLFN12LQ6IEE8 588 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 LRRC74BQ6ZQY2 392 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 BEST2Q8NFU1 509 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 MMP19Q99542 508 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 ZCWPW1Q9H0M4 648 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 NRDE2Q9H7Z3 1164 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 RNF181Q9P0P0 153 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 STK36Q9NRP7 1315 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 KBTBD13C9JR72 458 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 HSPA4LO95757 839 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 KRT8P05787 483 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 PCP11498 1178 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 PHKA2P46019 1235 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 GRIN1Q05586 938 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 TRIP13Q15645 432 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 TRIM16LQ309B1 348 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 C11orf91Q3C1V1 193 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 SLC27A3Q5K4L6 730 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 CRLF3Q8IUI8 442 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 TSEN2Q8NCE0 465 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 ACAP3Q96P50 834 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 EURLQ9NYK6 297 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 MAP3K20Q9NYL2 800 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 KLHL8Q9P2G9 620 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 AMACRQ9UHK6 382 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 SMG5Q9UPR3 1016 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 DEAF1O75398 565 aaPredicted RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 SERPINI2O75830 405 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 CYBBP04839 570 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 SERPIND1P05546 499 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 SRGNP10124 158 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 PRCPP42785 496 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 SNX30Q5VWJ9 437 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 APOA5Q6Q788 366 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 RINLQ6ZS11 566 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 TERB1Q8NA31 727 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 OTULINQ96BN8 352 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 PIGSQ96S52 555 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 DBR1Q9UK59 544 aaKnown RBP10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 GDAQ9Y2T3 454 aa10.38□□□□□ -0.75
SPTAN1-228ENST00000635853 KAT6BQ8WYB5 2073 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 SH2B2O14492 632 aaPredicted RBP10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 ZSCAN9O15535 394 aaPredicted RBP10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 DDX5P17844 614 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 FGFR4P22455 802 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 S100A1P23297 94 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 ST8SIA6P61647 398 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 LRRC41Q15345 812 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 EZH2Q15910 746 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 IZUMO2Q6UXV1 221 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 OTUB1Q96FW1 271 aaPredicted RBP10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 UPF3AQ9H1J1 476 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 FAM96AQ9H5X1 160 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 NFKBIL1Q9UBC1 381 aaPredicted RBP10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 SAMD9LQ8IVG5 1584 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 GOLGA8IPA6NC78 632 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 GOLGA8JA6NMD2 632 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 BBOX1O75936 387 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 USP4Q13107 963 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 SYTL3Q4VX76 610 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 HIPK4Q8NE63 616 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 SH3TC2Q8TF17 1288 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 GINM1Q9NU53 330 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 GIMAP4Q9NUV9 329 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 MAP10Q9P2G4 905 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 WDR35Q9P2L0 1181 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 WDR19Q8NEZ3 1342 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 IQANK1A0A1B0GTG1 560 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 CCDC189A1A4V9 331 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 GFPT2O94808 682 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 PCCAP05165 728 aaPredicted RBP10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 EIF2S1P05198 315 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 KRT4P19013 534 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 PPP1R15BQ5SWA1 713 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 MEI1Q5TIA1 1274 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 DDX50Q9BQ39 737 aaKnown RBP10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 GCNT4Q9P109 453 aa10.37□□□□□ -0.75
SPTAN1-228ENST00000635853 STRIP2Q9ULQ0 834 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms