RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 NSRP1Q9H0G5 558 aaKnown RBP11.46□□□□□ -0.57
PSPC1-207ENST00000635251 HAUS2Q9NVX0 235 aa11.46□□□□□ -0.57
PSPC1-207ENST00000635251 USP20Q9Y2K6 914 aa11.46□□□□□ -0.57
PSPC1-207ENST00000635251 TESPA1A2RU30 521 aaPredicted RBP11.46□□□□□ -0.58
PSPC1-207ENST00000635251 WDR64B1ANS9 1081 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 RASSF9O75901 435 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 ASNSP08243 561 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 RDXP35241 583 aaKnown RBP11.46□□□□□ -0.58
PSPC1-207ENST00000635251 NPTX2P47972 431 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 GPC3P51654 580 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 JAK3P52333 1124 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 AUHQ13825 339 aaKnown RBP11.46□□□□□ -0.58
PSPC1-207ENST00000635251 LACTB2Q53H82 288 aaPredicted RBP11.46□□□□□ -0.58
PSPC1-207ENST00000635251 LRRC34Q8IZ02 419 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 PLCD3Q8N3E9 789 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 C12orf50Q8NA57 414 aaPredicted RBP11.46□□□□□ -0.58
PSPC1-207ENST00000635251 TMEM161BQ8NDZ6 487 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 SYTL5Q8TDW5 730 aaPredicted RBP11.46□□□□□ -0.58
PSPC1-207ENST00000635251 CCT6BQ92526 530 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 ZNF317Q96PQ6 595 aaPredicted RBP11.46□□□□□ -0.58
PSPC1-207ENST00000635251 TMEM109Q9BVC6 243 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 ADAM7Q9H2U9 754 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 KDM4CQ9H3R0 1056 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 LRRC19Q9H756 370 aa11.46□□□□□ -0.58
PSPC1-207ENST00000635251 ASAP2O43150 1006 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 TBC1D12O60347 775 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 ACSL3O95573 720 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 CALCAP01258 141 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 GHRP10912 638 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 PGM5Q15124 567 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 LONRF1Q17RB8 773 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 CLEC16AQ2KHT3 1053 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 CHADLQ6NUI6 762 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 TRMT10CQ7L0Y3 403 aaKnown RBP11.45□□□□□ -0.58
PSPC1-207ENST00000635251 PHLDB2Q86SQ0 1253 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 TAX1BP1Q86VP1 789 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 MAP4K3Q8IVH8 894 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 C7orf43Q8WVR3 580 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 BICD1Q96G01 975 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 ELAC2Q9BQ52 826 aaKnown RBP11.45□□□□□ -0.58
PSPC1-207ENST00000635251 PI4K2AQ9BTU6 479 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 CDC42EP4Q9H3Q1 356 aaKnown RBP11.45□□□□□ -0.58
PSPC1-207ENST00000635251 CD248Q9HCU0 757 aa11.45□□□□□ -0.58
PSPC1-207ENST00000635251 CCT8L1PA6NM43 557 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 FSCN2O14926 492 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 ATP9AO75110 1047 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 SCP2P22307 547 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 SFNP31947 248 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 TRIP13Q15645 432 aaPredicted RBP11.44□□□□□ -0.58
PSPC1-207ENST00000635251 CYB5D1Q6P9G0 228 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 OTUD6AQ7L8S5 288 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 CCDC91Q7Z6B0 441 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 MGARPQ8TDB4 240 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 TMC2Q8TDI7 906 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 IPO4Q8TEX9 1081 aaKnown RBP11.44□□□□□ -0.58
PSPC1-207ENST00000635251 MAIP1Q8WWC4 291 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 PSPC1Q8WXF1 523 aaKnown RBP11.44□□□□□ -0.58
PSPC1-207ENST00000635251 DDX23Q9BUQ8 820 aaKnown RBP11.44□□□□□ -0.58
PSPC1-207ENST00000635251 ROPN1BQ9BZX4 212 aaPredicted RBP11.44□□□□□ -0.58
PSPC1-207ENST00000635251 ROPN1Q9HAT0 212 aaPredicted RBP11.44□□□□□ -0.58
PSPC1-207ENST00000635251 HOMER3Q9NSC5 361 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 ANKEF1Q9NU02 776 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 WHRNQ9P202 907 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 COQ4Q9Y3A0 265 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.44□□□□□ -0.58
PSPC1-207ENST00000635251 CHUKO15111 745 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 PLSCR1O15162 318 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 WDR46O15213 610 aaKnown RBP11.44□□□□□ -0.58
PSPC1-207ENST00000635251 ITIH2P19823 946 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 ATP5DP30049 168 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 RPS6P62753 249 aaKnown RBP11.44□□□□□ -0.58
PSPC1-207ENST00000635251 KRT76Q01546 638 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 CYP24A1Q07973 514 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 ITIH4Q14624 930 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 SNCBQ16143 134 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 CNGA2Q16280 664 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 ARHGEF16Q5VV41 709 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 SV2AQ7L0J3 742 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 CCDC50Q8IVM0 306 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 FUKQ8N0W3 1084 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 LARGE2Q8N3Y3 721 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 ATG4AQ8WYN0 398 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 DDX1Q92499 740 aaKnown RBP11.44□□□□□ -0.58
PSPC1-207ENST00000635251 SNF8Q96H20 258 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 CEP170P1Q96L14 293 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 RMDN3Q96TC7 470 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 JPH2Q9BR39 696 aaPredicted RBP11.44□□□□□ -0.58
PSPC1-207ENST00000635251 CHST7Q9NS84 486 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 C1orf112Q9NSG2 853 aa11.44□□□□□ -0.58
PSPC1-207ENST00000635251 DNAJC17Q9NVM6 304 aaKnown RBP11.44□□□□□ -0.58
PSPC1-207ENST00000635251 HNRNPDLO14979 420 aaKnown RBP11.43□□□□□ -0.58
PSPC1-207ENST00000635251 GAS8O95995 478 aa11.43□□□□□ -0.58
PSPC1-207ENST00000635251 CCNE2O96020 404 aa11.43□□□□□ -0.58
PSPC1-207ENST00000635251 GTF2H1P32780 548 aa11.43□□□□□ -0.58
PSPC1-207ENST00000635251 MAN1A1P33908 653 aa11.43□□□□□ -0.58
PSPC1-207ENST00000635251 SOX10P56693 466 aa11.43□□□□□ -0.58
PSPC1-207ENST00000635251 LRRC14Q15048 493 aa11.43□□□□□ -0.58
PSPC1-207ENST00000635251 EXOC3L1Q86VI1 746 aa11.43□□□□□ -0.58
PSPC1-207ENST00000635251 PARP9Q8IXQ6 854 aa11.43□□□□□ -0.58
PSPC1-207ENST00000635251 GPD1LQ8N335 351 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms