RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 GPR152Q8TDT2 470 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 SNX29Q8TEQ0 813 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 FOXD4L4Q8WXT5 416 aaPredicted RBP17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 NXPE3Q969Y0 559 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 POLR3CQ9BUI4 534 aaPredicted RBP17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 PRKD2Q9BZL6 878 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 TBC1D17Q9HA65 648 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 GPRC5CQ9NQ84 441 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 ZDHHC7Q9NXF8 308 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 FNIP2Q9P278 1114 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 DOCK8Q8NF50 2099 aa17.15■□□□□ 0.34
SNRNP48-203ENST00000634363 DOCK6Q96HP0 2047 aa17.14■□□□□ 0.34
SNRNP48-203ENST00000634363 A0A1B0GUA9 196 aa17.14■□□□□ 0.33
SNRNP48-203ENST00000634363 DCNP07585 359 aaKnown RBP17.14■□□□□ 0.33
SNRNP48-203ENST00000634363 RPA1P27694 616 aa17.14■□□□□ 0.33
SNRNP48-203ENST00000634363 KRT79Q5XKE5 535 aa17.14■□□□□ 0.33
SNRNP48-203ENST00000634363 LILRA6Q6PI73 481 aa17.14■□□□□ 0.33
SNRNP48-203ENST00000634363 CATSPER3Q86XQ3 398 aa17.14■□□□□ 0.33
SNRNP48-203ENST00000634363 PAAF1Q9BRP4 392 aa17.14■□□□□ 0.33
SNRNP48-203ENST00000634363 RHOBTB2Q9BYZ6 727 aa17.14■□□□□ 0.33
SNRNP48-203ENST00000634363 CASTOR2A6NHX0 329 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 MED24O75448 989 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 ZMYND10O75800 440 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 F13A1P00488 732 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 SPATA31C1P0DKV0 1188 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 LIG1P18858 919 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 MUTP22033 750 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 FSHRP23945 695 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 ID4P47928 161 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 FOXK2Q01167 660 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 CEBPZQ03701 1054 aaKnown RBP17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 HSP90AA2PQ14568 343 aaPredicted RBP17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 IL17AQ16552 155 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 FAM171A1Q5VUB5 890 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 POTEGQ6S5H5 508 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 GRASPQ7Z6J2 395 aaPredicted RBP17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 ZNF396Q96N95 335 aaPredicted RBP17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 NFKBIZQ9BYH8 718 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 POLIQ9UNA4 740 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 SIT1Q9Y3P8 196 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 CLIC4Q9Y696 253 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 R4GN57 208 aa17.13■□□□□ 0.33
SNRNP48-203ENST00000634363 CFAP54Q96N23 3096 aa17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 XRCC6P12956 609 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 CREMQ03060 361 aa17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 RTP2Q5QGT7 225 aa17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 DCLRE1AQ6PJP8 1040 aa17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 AK8Q96MA6 479 aa17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 NACC1Q96RE7 527 aa17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 TTPALQ9BTX7 342 aa17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 RPP25Q9BUL9 199 aaKnown RBP17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 SNTG2Q9NY99 539 aa17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 USP20Q9Y2K6 914 aa17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 NUMBLQ9Y6R0 609 aa17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 SF3B1O75533 1304 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNRNP48-203ENST00000634363 PP2D1A8MPX8 630 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 C1RP00736 705 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 THP07101 528 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 NTHL1P78549 312 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 TUSC3Q13454 348 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 HTR4Q13639 388 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 PKP1Q13835 747 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 PPM1LQ5SGD2 360 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 ZBTB8OSQ8IWT0 167 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 CDK5RAP3Q96JB5 506 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 USP28Q96RU2 1077 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 CLSTN3Q9BQT9 956 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 ARHGEF3Q9NR81 526 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 PRMT7Q9NVM4 692 aaPredicted RBP17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 FAM186AA6NE01 2351 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 MYO15AQ9UKN7 3530 aa17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 RIF1Q5UIP0 2472 aaKnown RBP17.11■□□□□ 0.33
SNRNP48-203ENST00000634363 TTLL13PA6NNM8 815 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 ANHXE9PGG2 379 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 CCL16O15467 120 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 LMNAP02545 664 aaKnown RBP17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 CDC25AP30304 524 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 LONP1P36776 959 aaKnown RBP17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 GPC5P78333 572 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 STK38Q15208 465 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 PTPAQ15257 358 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 ZRSR1Q15695 479 aaKnown RBP17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 PSMD5Q16401 504 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 LIN9Q5TKA1 542 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 PARM1Q6UWI2 310 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 GPR65Q8IYL9 337 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 CXCL16Q9H2A7 254 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 DDX19AQ9NUU7 478 aaKnown RBP17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 KIAA1024Q9UPX6 916 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 GDAQ9Y2T3 454 aa17.1■□□□□ 0.33
SNRNP48-203ENST00000634363 MYH15Q9Y2K3 1946 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 ARHGEF35A5YM69 484 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 N4BP3O15049 544 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 RECQL4O94761 1208 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 KIF4AO95239 1232 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 C8AP07357 584 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 MARCKSP29966 332 aaPredicted RBP17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 ANP32AP39687 249 aaKnown RBP17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 UBA7P41226 1012 aa17.09■□□□□ 0.33
SNRNP48-203ENST00000634363 PRPF4BQ13523 1007 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms